RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C TRM10Q12400 293 aa1.81□□□□□ -2.12
SHE2YKL130C HAP1P0CE41 1502 aa1.81□□□□□ -2.12
SHE2YKL130C DNF3Q12674 1656 aa1.8□□□□□ -2.12
SHE2YKL130C TY1B-JR2P47100 1755 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C TY1B-ER2Q03619 1755 aa1.8□□□□□ -2.12
SHE2YKL130C TY1B-MR1Q04214 1755 aa1.8□□□□□ -2.12
SHE2YKL130C TY1B-MR2Q04670 1755 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C TY1B-LR1Q12088 1755 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C TY1B-NL1Q12112 1755 aa1.8□□□□□ -2.12
SHE2YKL130C TY1B-GR1Q12141 1755 aa1.8□□□□□ -2.12
SHE2YKL130C TY1B-BLQ12490 1755 aa1.8□□□□□ -2.12
SHE2YKL130C CCH1P50077 2039 aa1.8□□□□□ -2.12
SHE2YKL130C YMR316C-AI2HB70 103 aa1.8□□□□□ -2.12
SHE2YKL130C CBP6P07253 162 aaPredicted RBP1.8□□□□□ -2.12
SHE2YKL130C MATALPHA1P0CY06 175 aa1.8□□□□□ -2.12
SHE2YKL130C HMLALPHA1P0CY07 175 aa1.8□□□□□ -2.12
SHE2YKL130C NHP6BP11633 99 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C RPS5P26783 225 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C PPA2P28239 310 aa1.8□□□□□ -2.12
SHE2YKL130C IMP1P28627 190 aa1.8□□□□□ -2.12
SHE2YKL130C CAM1P29547 415 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C QRI5P32344 111 aa1.8□□□□□ -2.12
SHE2YKL130C MRPL27P36526 146 aaPredicted RBP1.8□□□□□ -2.12
SHE2YKL130C SMP1P38128 452 aa1.8□□□□□ -2.12
SHE2YKL130C YIL054WP40524 105 aa1.8□□□□□ -2.12
SHE2YKL130C DSN1P40568 576 aa1.8□□□□□ -2.12
SHE2YKL130C PRP24P49960 444 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C NBP1P52919 319 aaPredicted RBP1.8□□□□□ -2.12
SHE2YKL130C NOP13P53883 403 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SHE2YKL130C MRPS16Q02608 121 aa1.8□□□□□ -2.12
SHE2YKL130C EBS1Q03466 884 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C INP1Q03694 420 aa1.8□□□□□ -2.12
SHE2YKL130C UTP15Q04305 513 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C MCH1Q07376 486 aa1.8□□□□□ -2.12
SHE2YKL130C YOL029CQ08187 201 aa1.8□□□□□ -2.12
SHE2YKL130C YDR018CQ12185 396 aa1.8□□□□□ -2.12
SHE2YKL130C SNU23Q12368 194 aaPredicted RBP1.8□□□□□ -2.12
SHE2YKL130C SNF8Q12483 233 aa1.8□□□□□ -2.12
SHE2YKL130C ADF1Q2V2Q1 113 aa1.8□□□□□ -2.12
SHE2YKL130C PSK1P31374 1356 aa1.8□□□□□ -2.12
SHE2YKL130C YSP2Q06681 1438 aa1.8□□□□□ -2.12
SHE2YKL130C ARO1P08566 1588 aaKnown RBP1.8□□□□□ -2.12
SHE2YKL130C RPL4AP10664 362 aaKnown RBP1.79□□□□□ -2.12
SHE2YKL130C HSP26P15992 214 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SHE2YKL130C RPO26P20435 155 aa1.79□□□□□ -2.12
SHE2YKL130C MRPL25P23369 157 aa1.79□□□□□ -2.12
SHE2YKL130C PBN1P25580 416 aa1.79□□□□□ -2.12
SHE2YKL130C HOM6P31116 359 aaKnown RBP1.79□□□□□ -2.12
SHE2YKL130C ZRT3P34240 503 aa1.79□□□□□ -2.12
SHE2YKL130C FZO1P38297 855 aa1.79□□□□□ -2.12
SHE2YKL130C ATG12P38316 186 aa1.79□□□□□ -2.12
SHE2YKL130C SEN34P39707 275 aa1.79□□□□□ -2.12
SHE2YKL130C YER184CP39961 794 aa1.79□□□□□ -2.12
SHE2YKL130C SMB1P40018 196 aaKnown RBP1.79□□□□□ -2.12
SHE2YKL130C RRT13P40042 185 aa1.79□□□□□ -2.12
SHE2YKL130C RRG9P40156 214 aa1.79□□□□□ -2.12
SHE2YKL130C SER33P40510 469 aa1.79□□□□□ -2.12
SHE2YKL130C GLG2P47011 380 aa1.79□□□□□ -2.12
SHE2YKL130C HOC1P47124 396 aa1.79□□□□□ -2.12
SHE2YKL130C RPL4BP49626 362 aaKnown RBP1.79□□□□□ -2.12
SHE2YKL130C HSH155P49955 971 aaKnown RBP1.79□□□□□ -2.12
SHE2YKL130C NBP35P52920 328 aa1.79□□□□□ -2.12
SHE2YKL130C YGL118CP53132 145 aa1.79□□□□□ -2.12
SHE2YKL130C USE1P53146 245 aa1.79□□□□□ -2.12
SHE2YKL130C YNL095CP53932 642 aa1.79□□□□□ -2.12
SHE2YKL130C SWS2P53937 143 aa1.79□□□□□ -2.12
SHE2YKL130C ASI3P53983 676 aa1.79□□□□□ -2.12
SHE2YKL130C YPL113CQ02961 396 aa1.79□□□□□ -2.12
SHE2YKL130C BNA7Q04066 261 aa1.79□□□□□ -2.12
SHE2YKL130C SPO77Q06134 477 aa1.79□□□□□ -2.12
SHE2YKL130C ATG17Q06410 417 aa1.79□□□□□ -2.12
SHE2YKL130C YCT1Q12235 531 aa1.79□□□□□ -2.12
SHE2YKL130C RAX2Q12465 1220 aa1.79□□□□□ -2.12
SHE2YKL130C NCB2Q92317 146 aa1.79□□□□□ -2.12
SHE2YKL130C PDR11P40550 1411 aa1.79□□□□□ -2.12
SHE2YKL130C TY1B-NL2Q99337 1749 aaKnown RBP1.79□□□□□ -2.12
SHE2YKL130C CHC1P22137 1653 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C THP2O13539 261 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C TPI1P00942 248 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C CDC36P06100 191 aaPredicted RBP1.78□□□□□ -2.12
SHE2YKL130C ARG80P07249 177 aa1.78□□□□□ -2.12
SHE2YKL130C POX1P13711 748 aa1.78□□□□□ -2.12
SHE2YKL130C COQ1P18900 473 aa1.78□□□□□ -2.12
SHE2YKL130C OSM1P21375 501 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C ATG15P25641 520 aa1.78□□□□□ -2.12
SHE2YKL130C VMA6P32366 345 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C CAT2P32796 670 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C JEN1P36035 616 aa1.78□□□□□ -2.12
SHE2YKL130C MED8P38304 223 aa1.78□□□□□ -2.12
SHE2YKL130C CUE1P38428 203 aa1.78□□□□□ -2.12
SHE2YKL130C SIP3P38717 1229 aa1.78□□□□□ -2.12
SHE2YKL130C YHI9P38765 294 aa1.78□□□□□ -2.12
SHE2YKL130C ASP1P38986 381 aaPredicted RBP1.78□□□□□ -2.12
SHE2YKL130C EDC2P40023 145 aaPredicted RBP1.78□□□□□ -2.12
SHE2YKL130C COX15P40086 486 aa1.78□□□□□ -2.12
SHE2YKL130C AVT7P40501 490 aa1.78□□□□□ -2.12
SHE2YKL130C YIL012WP40551 113 aa1.78□□□□□ -2.12
SHE2YKL130C RPC17P47076 161 aa1.78□□□□□ -2.12
SHE2YKL130C SLX9P53251 210 aaPredicted RBP1.78□□□□□ -2.12
SHE2YKL130C HAL1Q01766 294 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms