RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W GOR1P53839 350 aa2□□□□□ -2.09
NUP100YKL068W CCE1Q03702 353 aa2□□□□□ -2.09
NUP100YKL068W TRM82Q03774 444 aa2□□□□□ -2.09
NUP100YKL068W GRX8Q05926 109 aa2□□□□□ -2.09
NUP100YKL068W RRS1Q08746 203 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W YLR126CQ12288 251 aa2□□□□□ -2.09
NUP100YKL068W UTP23Q12339 254 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W YAR066WP0CX18 203 aa2□□□□□ -2.09
NUP100YKL068W YHR214WP0CX19 203 aa2□□□□□ -2.09
NUP100YKL068W EXO70P19658 623 aa2□□□□□ -2.09
NUP100YKL068W COQ3P27680 312 aa2□□□□□ -2.09
NUP100YKL068W KAR9P32526 644 aa2□□□□□ -2.09
NUP100YKL068W YEF1P32622 495 aa2□□□□□ -2.09
NUP100YKL068W OMA1P36163 345 aa2□□□□□ -2.09
NUP100YKL068W SSH1P38353 490 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W OSH3P38713 996 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W MTC6P38849 526 aa2□□□□□ -2.09
NUP100YKL068W PHO90P39535 881 aa2□□□□□ -2.09
NUP100YKL068W TES1P41903 349 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W YJL016WP47072 561 aa2□□□□□ -2.09
NUP100YKL068W YPS5P53057 165 aa2□□□□□ -2.09
NUP100YKL068W NRD1P53617 575 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
NUP100YKL068W YNR066CP53752 436 aa2□□□□□ -2.09
NUP100YKL068W HCH1P53834 153 aa2□□□□□ -2.09
NUP100YKL068W YLR152CP54072 576 aa2□□□□□ -2.09
NUP100YKL068W ORM2Q06144 216 aa2□□□□□ -2.09
NUP100YKL068W NOC4Q06512 552 aaPredicted RBP2□□□□□ -2.09
NUP100YKL068W MHR1Q06630 226 aa2□□□□□ -2.09
NUP100YKL068W YET3Q07451 203 aa2□□□□□ -2.09
NUP100YKL068W YAP7Q08182 245 aa2□□□□□ -2.09
NUP100YKL068W HNT3Q08702 217 aa2□□□□□ -2.09
NUP100YKL068W YPL119C-AQ3E751 87 aa2□□□□□ -2.09
NUP100YKL068W PET54P10834 293 aa2□□□□□ -2.09
NUP100YKL068W DPM1P14020 267 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W VPH2P32341 215 aa2□□□□□ -2.09
NUP100YKL068W CAF4P36130 643 aa2□□□□□ -2.09
NUP100YKL068W UTH1P36135 365 aa2□□□□□ -2.09
NUP100YKL068W YCR087C-AP37263 153 aa2□□□□□ -2.09
NUP100YKL068W SHG1P38337 142 aa2□□□□□ -2.09
NUP100YKL068W NDT80P38830 627 aa2□□□□□ -2.09
NUP100YKL068W YER076CP40049 302 aa2□□□□□ -2.09
NUP100YKL068W SWC4P53201 476 aa2□□□□□ -2.09
NUP100YKL068W YNR048WP53740 393 aa2□□□□□ -2.09
NUP100YKL068W NRK1P53915 240 aa2□□□□□ -2.09
NUP100YKL068W RHO3Q00245 231 aaKnown RBP2□□□□□ -2.09
NUP100YKL068W YOL019WQ08157 551 aa2□□□□□ -2.09
NUP100YKL068W YNG1Q08465 219 aa2□□□□□ -2.09
NUP100YKL068W RRP42Q12277 265 aaPredicted RBP2□□□□□ -2.09
NUP100YKL068W SNU23Q12368 194 aaPredicted RBP2□□□□□ -2.09
NUP100YKL068W RPN6Q12377 434 aa2□□□□□ -2.09
NUP100YKL068W YPR064WQ12492 139 aa2□□□□□ -2.09
NUP100YKL068W LAA1P39526 2014 aa1.99□□□□□ -2.09
NUP100YKL068W TUB1P09733 447 aaKnown RBP1.99□□□□□ -2.09
NUP100YKL068W ERD1P16151 362 aa1.99□□□□□ -2.09
NUP100YKL068W GLN3P18494 730 aa1.99□□□□□ -2.09
NUP100YKL068W YCR007CP25354 239 aa1.99□□□□□ -2.09
NUP100YKL068W RNQ1P25367 405 aa1.99□□□□□ -2.09
NUP100YKL068W YNK1P36010 153 aaKnown RBP1.99□□□□□ -2.09
NUP100YKL068W ARN1P38731 627 aa1.99□□□□□ -2.09
NUP100YKL068W BDH2P39713 417 aa1.99□□□□□ -2.09
NUP100YKL068W VPS52P39904 641 aa1.99□□□□□ -2.09
NUP100YKL068W PRE6P40303 254 aaKnown RBP1.99□□□□□ -2.09
NUP100YKL068W GAT1P43574 510 aa1.99□□□□□ -2.09
NUP100YKL068W BIR1P47134 954 aa1.99□□□□□ -2.09
NUP100YKL068W VHT1P53241 593 aa1.99□□□□□ -2.09
NUP100YKL068W COS1P53822 381 aa1.99□□□□□ -2.09
NUP100YKL068W PRM6Q04705 352 aa1.99□□□□□ -2.09
NUP100YKL068W RFU1Q08003 200 aa1.99□□□□□ -2.09
NUP100YKL068W YOL073CQ08232 322 aa1.99□□□□□ -2.09
NUP100YKL068W SGT1Q08446 395 aa1.99□□□□□ -2.09
NUP100YKL068W RSA1Q08932 381 aa1.99□□□□□ -2.09
NUP100YKL068W YPL199CQ08954 240 aa1.99□□□□□ -2.09
NUP100YKL068W USB1Q12208 290 aaKnown RBP1.99□□□□□ -2.09
NUP100YKL068W REP1P03871 373 aa1.99□□□□□ -2.09
NUP100YKL068W YOL163WP0CF20 169 aa1.99□□□□□ -2.09
NUP100YKL068W CTS1P29029 562 aa1.99□□□□□ -2.09
NUP100YKL068W HRR25P29295 494 aaKnown RBP1.99□□□□□ -2.09
NUP100YKL068W MDH3P32419 343 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09 RIP-Chip
NUP100YKL068W SGE1P33335 543 aa1.99□□□□□ -2.09
NUP100YKL068W CLG1P35190 452 aa1.99□□□□□ -2.09
NUP100YKL068W PHD1P36093 366 aa1.99□□□□□ -2.09
NUP100YKL068W GUF1P46943 645 aa1.99□□□□□ -2.09
NUP100YKL068W YJR111CP47148 283 aaKnown RBP1.99□□□□□ -2.09
NUP100YKL068W UBC13P52490 153 aa1.99□□□□□ -2.09
NUP100YKL068W YMR166CQ03829 368 aa1.99□□□□□ -2.09
NUP100YKL068W YPR098CQ06089 161 aa1.99□□□□□ -2.09
NUP100YKL068W SME1Q12330 94 aaPredicted RBP1.99□□□□□ -2.09
NUP100YKL068W RPS14AP06367 137 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W RPS8AP0CX39 200 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W RPS8BP0CX40 200 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W SAM2P19358 384 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W DBF2P22204 572 aa1.98□□□□□ -2.09
NUP100YKL068W SLY1P22213 666 aa1.98□□□□□ -2.09
NUP100YKL068W INO2P26798 304 aa1.98□□□□□ -2.09
NUP100YKL068W TIP1P27654 210 aaPredicted RBP1.98□□□□□ -2.09
NUP100YKL068W ANR2P36090 516 aaPredicted RBP1.98□□□□□ -2.09
NUP100YKL068W RPS14BP39516 138 aaKnown RBP1.98□□□□□ -2.09
NUP100YKL068W YNL320WP42840 284 aa1.98□□□□□ -2.09
NUP100YKL068W COS4P43542 379 aa1.98□□□□□ -2.09
NUP100YKL068W PMT4P46971 762 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms