RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C YAL063C-AQ3E791 96 aa1.72□□□□□ -2.13
TPM2YIL138C PRE7P23724 241 aaKnown RBP1.71□□□□□ -2.14
TPM2YIL138C ARO4P32449 370 aaKnown RBP1.71□□□□□ -2.14
TPM2YIL138C AEP1P32493 518 aa1.71□□□□□ -2.14
TPM2YIL138C MBA1P38300 278 aa1.71□□□□□ -2.14
TPM2YIL138C SEN34P39707 275 aa1.71□□□□□ -2.14
TPM2YIL138C UFD1P53044 361 aa1.71□□□□□ -2.14
TPM2YIL138C DXO1Q06349 442 aa1.71□□□□□ -2.14
TPM2YIL138C SGT2Q12118 346 aaKnown RBP1.71□□□□□ -2.14
TPM2YIL138C YPL150WQ12152 901 aa1.71□□□□□ -2.14
TPM2YIL138C YPR063CQ12160 140 aa1.71□□□□□ -2.14
TPM2YIL138C YRF1-3P0CX14 1859 aa1.7□□□□□ -2.14
TPM2YIL138C YRF1-7P0CX15 1859 aa1.7□□□□□ -2.14
TPM2YIL138C MATALPHA2P0CY08 210 aa1.7□□□□□ -2.14
TPM2YIL138C HMLALPHA2P0CY09 210 aa1.7□□□□□ -2.14
TPM2YIL138C YAK1P14680 807 aa1.7□□□□□ -2.14
TPM2YIL138C FRS2P15625 503 aaKnown RBP1.7□□□□□ -2.14
TPM2YIL138C PHO80P20052 293 aa1.7□□□□□ -2.14
TPM2YIL138C SUA5P32579 426 aa1.7□□□□□ -2.14
TPM2YIL138C TKL2P33315 681 aa1.7□□□□□ -2.14
TPM2YIL138C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
TPM2YIL138C MED8P38304 223 aa1.7□□□□□ -2.14
TPM2YIL138C ECM14P38836 430 aa1.7□□□□□ -2.14
TPM2YIL138C AVT6P40074 448 aa1.7□□□□□ -2.14
TPM2YIL138C AVT7P40501 490 aa1.7□□□□□ -2.14
TPM2YIL138C BUD13P46947 266 aaPredicted RBP1.7□□□□□ -2.14
TPM2YIL138C EMC2P47133 292 aaKnown RBP1.7□□□□□ -2.14
TPM2YIL138C GPI8P49018 411 aa1.7□□□□□ -2.14
TPM2YIL138C YRF1-6P53819 1859 aa1.7□□□□□ -2.14
TPM2YIL138C SWT21P53873 357 aaPredicted RBP1.7□□□□□ -2.14
TPM2YIL138C YDR114CQ04597 100 aa1.7□□□□□ -2.14
TPM2YIL138C GTO3Q04806 366 aa1.7□□□□□ -2.14
TPM2YIL138C TAF9Q05027 157 aa1.7□□□□□ -2.14
TPM2YIL138C NNT1Q05874 261 aa1.7□□□□□ -2.14
TPM2YIL138C YPR096CO13587 100 aa1.69□□□□□ -2.14
TPM2YIL138C RPL22AP05749 121 aaKnown RBP1.69□□□□□ -2.14
TPM2YIL138C SSA3P09435 649 aaKnown RBP1.69□□□□□ -2.14
TPM2YIL138C KRE6P32486 720 aa1.69□□□□□ -2.14
TPM2YIL138C COT1P32798 439 aa1.69□□□□□ -2.14
TPM2YIL138C PPQ1P32945 549 aa1.69□□□□□ -2.14
TPM2YIL138C PRX1P34227 261 aaKnown RBP1.69□□□□□ -2.14
TPM2YIL138C EBP2P36049 427 aaKnown RBP1.69□□□□□ -2.14
TPM2YIL138C YBL081WP38180 368 aaKnown RBP1.69□□□□□ -2.14
TPM2YIL138C PHO89P38361 574 aa1.69□□□□□ -2.14
TPM2YIL138C YHL044WP38727 235 aa1.69□□□□□ -2.14
TPM2YIL138C RTT105P40063 208 aa1.69□□□□□ -2.14
TPM2YIL138C RSM25P40496 264 aa1.69□□□□□ -2.14
TPM2YIL138C SYS1P41544 203 aa1.69□□□□□ -2.14
TPM2YIL138C YFR045WP43617 309 aa1.69□□□□□ -2.14
TPM2YIL138C TPN1P53099 579 aa1.69□□□□□ -2.14
TPM2YIL138C OSH6Q02201 448 aa1.69□□□□□ -2.14
TPM2YIL138C SPP2Q02521 185 aa1.69□□□□□ -2.14
TPM2YIL138C YML018CQ03730 393 aa1.69□□□□□ -2.14
TPM2YIL138C YLL007CQ07799 665 aa1.69□□□□□ -2.14
TPM2YIL138C MRX4Q12467 430 aa1.69□□□□□ -2.14
TPM2YIL138C DDP1Q99321 188 aaKnown RBP1.69□□□□□ -2.14
TPM2YIL138C YMR316C-AI2HB70 103 aa1.68□□□□□ -2.14
TPM2YIL138C TDH1P00360 332 aaKnown RBP1.68□□□□□ -2.14
TPM2YIL138C PET494P07390 489 aaPredicted RBP1.68□□□□□ -2.14
TPM2YIL138C OM45P16547 393 aa1.68□□□□□ -2.14
TPM2YIL138C CAT2P32796 670 aaKnown RBP1.68□□□□□ -2.14
TPM2YIL138C MRPL37P36532 105 aa1.68□□□□□ -2.14
TPM2YIL138C SPL2P38839 148 aa1.68□□□□□ -2.14
TPM2YIL138C RPE1P46969 238 aa1.68□□□□□ -2.14
TPM2YIL138C FMP33P46998 180 aa1.68□□□□□ -2.14
TPM2YIL138C RPN14P53196 417 aa1.68□□□□□ -2.14
TPM2YIL138C PEX31P53203 462 aa1.68□□□□□ -2.14
TPM2YIL138C RSM27P53305 110 aa1.68□□□□□ -2.14
TPM2YIL138C VPS60Q03390 229 aa1.68□□□□□ -2.14
TPM2YIL138C FIG2P25653 1609 aa1.68□□□□□ -2.14
TPM2YIL138C RPS3P05750 240 aaKnown RBP1.67□□□□□ -2.14
TPM2YIL138C YOL163WP0CF20 169 aa1.67□□□□□ -2.14
TPM2YIL138C COQ1P18900 473 aa1.67□□□□□ -2.14
TPM2YIL138C POF1P25576 258 aa1.67□□□□□ -2.14
TPM2YIL138C ATG15P25641 520 aa1.67□□□□□ -2.14
TPM2YIL138C CAM1P29547 415 aaKnown RBP1.67□□□□□ -2.14
TPM2YIL138C BMH2P34730 273 aaKnown RBP1.67□□□□□ -2.14
TPM2YIL138C POP8P38208 133 aa1.67□□□□□ -2.14
TPM2YIL138C SMC2P38989 1170 aaKnown RBP1.67□□□□□ -2.14
TPM2YIL138C SPO73P40031 143 aa1.67□□□□□ -2.14
TPM2YIL138C MEP1P40260 492 aa1.67□□□□□ -2.14
TPM2YIL138C YFH7P43591 353 aa1.67□□□□□ -2.14
TPM2YIL138C MYO5Q04439 1219 aaKnown RBP1.67□□□□□ -2.14
TPM2YIL138C INM2Q05533 292 aa1.67□□□□□ -2.14
TPM2YIL138C SFH1Q06168 426 aa1.67□□□□□ -2.14
TPM2YIL138C PER33Q12144 273 aa1.67□□□□□ -2.14
TPM2YIL138C UTP10P42945 1769 aaKnown RBP1.67□□□□□ -2.14
TPM2YIL138C MET2P08465 486 aa1.66□□□□□ -2.14
TPM2YIL138C MET16P18408 261 aaPredicted RBP1.66□□□□□ -2.14
TPM2YIL138C MAK31P23059 88 aa1.66□□□□□ -2.14
TPM2YIL138C BMH1P29311 267 aaKnown RBP1.66□□□□□ -2.14
TPM2YIL138C ATG12P38316 186 aa1.66□□□□□ -2.14
TPM2YIL138C RCY1P39531 840 aa1.66□□□□□ -2.14
TPM2YIL138C IBA57P47158 497 aa1.66□□□□□ -2.14
TPM2YIL138C MIG2P53035 382 aa1.66□□□□□ -2.14
TPM2YIL138C TIM21P53220 239 aa1.66□□□□□ -2.14
TPM2YIL138C ALG9P53868 555 aaKnown RBP1.66□□□□□ -2.14
TPM2YIL138C TRM44Q02648 567 aaKnown RBP1.66□□□□□ -2.14
TPM2YIL138C TVP15Q03860 143 aa1.66□□□□□ -2.14
TPM2YIL138C VBA1Q04301 562 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms