RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W MRPL9P31334 269 aa3.12□□□□□ -1.91
CAF130YGR134W MBA1P38300 278 aa3.12□□□□□ -1.91
CAF130YGR134W DER1P38307 211 aa3.12□□□□□ -1.91
CAF130YGR134W TRS20P38334 175 aa3.12□□□□□ -1.91
CAF130YGR134W YHK8P38776 514 aa3.12□□□□□ -1.91
CAF130YGR134W CHL4P38907 458 aa3.12□□□□□ -1.91
CAF130YGR134W UFE1P41834 346 aa3.12□□□□□ -1.91
CAF130YGR134W YGL034CP53186 121 aa3.12□□□□□ -1.91
CAF130YGR134W YLR152CP54072 576 aa3.12□□□□□ -1.91
CAF130YGR134W PRM15Q03262 622 aa3.12□□□□□ -1.91
CAF130YGR134W ARC18Q05933 178 aaKnown RBP3.12□□□□□ -1.91
CAF130YGR134W SSK1Q07084 712 aa3.12□□□□□ -1.91
CAF130YGR134W NUP57P48837 541 aa3.12□□□□□ -1.91
CAF130YGR134W PRP24P49960 444 aaKnown RBP3.12□□□□□ -1.91
CAF130YGR134W BRR6P53062 197 aa3.12□□□□□ -1.91
CAF130YGR134W PDR17P53844 350 aa3.12□□□□□ -1.91
CAF130YGR134W YLR446WQ06204 433 aa3.12□□□□□ -1.91
CAF130YGR134W CSR2Q12734 1121 aa3.12□□□□□ -1.91
CAF130YGR134W MCK1P21965 375 aaKnown RBP3.11□□□□□ -1.91
CAF130YGR134W CPR3P25719 182 aa3.11□□□□□ -1.91
CAF130YGR134W ITR2P30606 609 aa3.11□□□□□ -1.91
CAF130YGR134W YCR041WP37265 110 aa3.11□□□□□ -1.91
CAF130YGR134W RBG1P39729 369 aa3.11□□□□□ -1.91
CAF130YGR134W GAS2Q06135 555 aa3.11□□□□□ -1.91
CAF130YGR134W TMA10Q06177 86 aa3.11□□□□□ -1.91
CAF130YGR134W YDL114WQ07530 308 aa3.11□□□□□ -1.91
CAF130YGR134W YLR031WQ07978 186 aa3.11□□□□□ -1.91
CAF130YGR134W JLP1Q12358 412 aa3.11□□□□□ -1.91
CAF130YGR134W QCR2P07257 368 aa3.11□□□□□ -1.91
CAF130YGR134W MRS3P10566 314 aa3.11□□□□□ -1.91
CAF130YGR134W GAS1P22146 559 aaKnown RBP3.11□□□□□ -1.91
CAF130YGR134W SPO11P23179 398 aa3.11□□□□□ -1.91
CAF130YGR134W CTS1P29029 562 aa3.11□□□□□ -1.91
CAF130YGR134W SPT4P32914 102 aaPredicted RBP3.11□□□□□ -1.91
CAF130YGR134W GPX1P36014 167 aa3.11□□□□□ -1.91
CAF130YGR134W YPT35P38815 214 aaKnown RBP3.11□□□□□ -1.91
CAF130YGR134W AIM23P47015 356 aa3.11□□□□□ -1.91
CAF130YGR134W NRD1P53617 575 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
CAF130YGR134W YNR014WP53719 212 aa3.11□□□□□ -1.91
CAF130YGR134W ATP23P53722 227 aa3.11□□□□□ -1.91
CAF130YGR134W TRM82Q03774 444 aa3.11□□□□□ -1.91
CAF130YGR134W TSA2Q04120 196 aa3.11□□□□□ -1.91
CAF130YGR134W YOR283WQ12040 230 aaKnown RBP3.11□□□□□ -1.91
CAF130YGR134W IDH1P28834 360 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
CAF130YGR134W FRE2P36033 711 aa3.11□□□□□ -1.91
CAF130YGR134W VPS52P39904 641 aa3.11□□□□□ -1.91
CAF130YGR134W SWF1Q04629 336 aa3.11□□□□□ -1.91
CAF130YGR134W BCH1Q05029 724 aa3.11□□□□□ -1.91
CAF130YGR134W PFA4Q12006 378 aa3.11□□□□□ -1.91
CAF130YGR134W YPQ1Q12010 308 aa3.11□□□□□ -1.91
CAF130YGR134W MRX4Q12467 430 aa3.11□□□□□ -1.91
CAF130YGR134W EFG1Q3E705 233 aaKnown RBP3.11□□□□□ -1.91
CAF130YGR134W SWI1P09547 1314 aa3.1□□□□□ -1.91
CAF130YGR134W AEP1P32493 518 aa3.1□□□□□ -1.91
CAF130YGR134W ZRT1P32804 376 aa3.1□□□□□ -1.91
CAF130YGR134W USE1P53146 245 aa3.1□□□□□ -1.91
CAF130YGR134W COG5P53951 403 aa3.1□□□□□ -1.91
CAF130YGR134W TMA20P89886 181 aaPredicted RBP3.1□□□□□ -1.91
CAF130YGR134W RAX2Q12465 1220 aa3.1□□□□□ -1.91
CAF130YGR134W YCR023CP25351 611 aa3.1□□□□□ -1.91
CAF130YGR134W MNS1P32906 549 aa3.1□□□□□ -1.91
CAF130YGR134W AVT5P38176 459 aa3.1□□□□□ -1.91
CAF130YGR134W MTC4P38335 694 aaKnown RBP3.1□□□□□ -1.91
CAF130YGR134W GRE3P38715 327 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
CAF130YGR134W YIL029CP40538 142 aa3.1□□□□□ -1.91
CAF130YGR134W ORC5P50874 479 aa3.1□□□□□ -1.91
CAF130YGR134W TRM12Q04235 462 aa3.1□□□□□ -1.91
CAF130YGR134W GLO2Q05584 274 aa3.1□□□□□ -1.91
CAF130YGR134W HCR1Q05775 265 aaKnown RBP3.1□□□□□ -1.91
CAF130YGR134W PEX30Q06169 523 aa3.1□□□□□ -1.91
CAF130YGR134W YOL073CQ08232 322 aa3.1□□□□□ -1.91
CAF130YGR134W MRS1P07266 363 aa3.09□□□□□ -1.91
CAF130YGR134W PUB1P32588 453 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
CAF130YGR134W UPS2P35200 230 aa3.09□□□□□ -1.91
CAF130YGR134W RIM2P38127 377 aa3.09□□□□□ -1.91
CAF130YGR134W FZO1P38297 855 aa3.09□□□□□ -1.91
CAF130YGR134W BDH1P39714 382 aa3.09□□□□□ -1.91
CAF130YGR134W YER076CP40049 302 aa3.09□□□□□ -1.91
CAF130YGR134W KIN4Q01919 800 aa3.09□□□□□ -1.91
CAF130YGR134W YMR320WQ04897 101 aa3.09□□□□□ -1.91
CAF130YGR134W MSA1Q08471 629 aa3.09□□□□□ -1.91
CAF130YGR134W PHO2P07269 559 aa3.09□□□□□ -1.91
CAF130YGR134W YCR025CP25352 136 aa3.09□□□□□ -1.91
CAF130YGR134W PHD1P36093 366 aa3.09□□□□□ -1.91
CAF130YGR134W MED8P38304 223 aa3.09□□□□□ -1.91
CAF130YGR134W NDT80P38830 627 aa3.09□□□□□ -1.91
CAF130YGR134W VRG4P40107 337 aa3.09□□□□□ -1.91
CAF130YGR134W ARG2P40360 574 aa3.09□□□□□ -1.91
CAF130YGR134W GWT1P47026 490 aa3.09□□□□□ -1.91
CAF130YGR134W MMS2P53152 137 aa3.09□□□□□ -1.91
CAF130YGR134W YNL046WP53956 172 aa3.09□□□□□ -1.91
CAF130YGR134W YET3Q07451 203 aa3.09□□□□□ -1.91
CAF130YGR134W MDM10P18409 493 aa3.09□□□□□ -1.92
CAF130YGR134W YCR100CP25606 316 aa3.09□□□□□ -1.92
CAF130YGR134W CBP4P37267 147 aa3.09□□□□□ -1.92
CAF130YGR134W SHG1P38337 142 aa3.09□□□□□ -1.92
CAF130YGR134W CYC2P38909 366 aa3.09□□□□□ -1.92
CAF130YGR134W YPS5P53057 165 aa3.09□□□□□ -1.92
CAF130YGR134W POP6P53218 158 aa3.09□□□□□ -1.92
CAF130YGR134W YMR181CQ03231 154 aa3.09□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms