RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W ERG24P32462 438 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W ASH1P34233 588 aa3.37□□□□□ -1.87
SPT6YGR116W ELF1P36053 145 aa3.37□□□□□ -1.87
SPT6YGR116W YKL075CP36083 450 aa3.37□□□□□ -1.87
SPT6YGR116W MRPL27P36526 146 aaPredicted RBP3.37□□□□□ -1.87
SPT6YGR116W MAL32P38158 584 aa3.37□□□□□ -1.87
SPT6YGR116W PTH1P38876 190 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W SCS3P53012 380 aa3.37□□□□□ -1.87
SPT6YGR116W TGL2P54857 326 aa3.37□□□□□ -1.87
SPT6YGR116W ATC1Q04005 294 aa3.37□□□□□ -1.87
SPT6YGR116W SEC13Q04491 297 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W YMR253CQ04835 414 aa3.37□□□□□ -1.87
SPT6YGR116W RRT7Q07829 113 aa3.37□□□□□ -1.87
SPT6YGR116W URA6P15700 204 aa3.36□□□□□ -1.87
SPT6YGR116W GEX1P25596 615 aa3.36□□□□□ -1.87
SPT6YGR116W YEF1P32622 495 aa3.36□□□□□ -1.87
SPT6YGR116W GEX2P36173 615 aa3.36□□□□□ -1.87
SPT6YGR116W CHK1P38147 527 aa3.36□□□□□ -1.87
SPT6YGR116W CHS7P38843 316 aa3.36□□□□□ -1.87
SPT6YGR116W YIR016WP40572 265 aa3.36□□□□□ -1.87
SPT6YGR116W FLC3P53121 802 aa3.36□□□□□ -1.87
SPT6YGR116W YMR206WQ03695 313 aa3.36□□□□□ -1.87
SPT6YGR116W GMC1Q04399 608 aa3.36□□□□□ -1.87
SPT6YGR116W NAT4Q04751 285 aa3.36□□□□□ -1.87
SPT6YGR116W YDL177CQ12257 170 aa3.36□□□□□ -1.87
SPT6YGR116W SGA1P08019 549 aa3.36□□□□□ -1.87
SPT6YGR116W PAU19P0CE85 124 aa3.36□□□□□ -1.87
SPT6YGR116W PAU21P0CE86 164 aa3.36□□□□□ -1.87
SPT6YGR116W PAU22P0CE87 164 aa3.36□□□□□ -1.87
SPT6YGR116W PDX1P16451 410 aa3.36□□□□□ -1.87
SPT6YGR116W SCL1P21243 252 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W GPI12P23797 304 aa3.36□□□□□ -1.87
SPT6YGR116W PAU3P25610 124 aa3.36□□□□□ -1.87
SPT6YGR116W NTH1P32356 751 aa3.36□□□□□ -1.87
SPT6YGR116W MET30P39014 640 aa3.36□□□□□ -1.87
SPT6YGR116W AGE2P40529 298 aa3.36□□□□□ -1.87
SPT6YGR116W OTU1P43558 301 aa3.36□□□□□ -1.87
SPT6YGR116W GPI14P47088 403 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W CCC1P47818 322 aa3.36□□□□□ -1.87
SPT6YGR116W MAL12P53341 584 aa3.36□□□□□ -1.87
SPT6YGR116W RHO4Q00246 291 aa3.36□□□□□ -1.87
SPT6YGR116W CYT2Q00873 224 aa3.36□□□□□ -1.87
SPT6YGR116W TDA6Q06466 467 aa3.36□□□□□ -1.87
SPT6YGR116W VAM3Q12241 283 aa3.36□□□□□ -1.87
SPT6YGR116W ODC2Q99297 307 aa3.36□□□□□ -1.87
SPT6YGR116W TPI1P00942 248 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W CKA1P15790 372 aa3.36□□□□□ -1.87
SPT6YGR116W YCR101CP25607 182 aa3.36□□□□□ -1.87
SPT6YGR116W ATG15P25641 520 aa3.36□□□□□ -1.87
SPT6YGR116W AIM29P36154 155 aa3.36□□□□□ -1.87
SPT6YGR116W SOH1P38633 127 aa3.36□□□□□ -1.87
SPT6YGR116W YPT35P38815 214 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W GGC1P38988 300 aa3.36□□□□□ -1.87
SPT6YGR116W YEL068CP39977 110 aa3.36□□□□□ -1.87
SPT6YGR116W MMF1P40185 145 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W GAT2P40209 560 aa3.36□□□□□ -1.87
SPT6YGR116W TAX4P47030 604 aa3.36□□□□□ -1.87
SPT6YGR116W SEH1P53011 349 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W PIR1Q03178 341 aa3.36□□□□□ -1.87
SPT6YGR116W YML018CQ03730 393 aa3.36□□□□□ -1.87
SPT6YGR116W SEN15Q04675 128 aa3.36□□□□□ -1.87
SPT6YGR116W YMR310CQ04867 317 aaPredicted RBP3.36□□□□□ -1.87
SPT6YGR116W SNT309Q06091 175 aaPredicted RBP3.36□□□□□ -1.87
SPT6YGR116W PUS5Q06244 254 aa3.36□□□□□ -1.87
SPT6YGR116W GLO4Q12320 285 aa3.36□□□□□ -1.87
SPT6YGR116W YLR118CQ12354 227 aa3.36□□□□□ -1.87
SPT6YGR116W SLH1P53327 1967 aaKnown RBP3.36□□□□□ -1.87
SPT6YGR116W PPH21P23594 369 aa3.35□□□□□ -1.87
SPT6YGR116W SEF1P34228 1148 aa3.35□□□□□ -1.87
SPT6YGR116W SDS24P38314 527 aa3.35□□□□□ -1.87
SPT6YGR116W RFC2P40348 353 aa3.35□□□□□ -1.87
SPT6YGR116W DLS1P40366 167 aa3.35□□□□□ -1.87
SPT6YGR116W UBP8P50102 471 aa3.35□□□□□ -1.87
SPT6YGR116W ERP1Q05359 219 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W YOR365CQ08844 703 aa3.35□□□□□ -1.87
SPT6YGR116W PNO1Q99216 274 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W HAP3P13434 144 aa3.35□□□□□ -1.87
SPT6YGR116W DEG1P31115 442 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W SSH4P32343 579 aa3.35□□□□□ -1.87
SPT6YGR116W NTF2P33331 125 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W YBR013CP38215 129 aa3.35□□□□□ -1.87
SPT6YGR116W MNN10P50108 393 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W SCW4P53334 386 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W OGG1P53397 376 aaPredicted RBP3.35□□□□□ -1.87
SPT6YGR116W YNR066CP53752 436 aa3.35□□□□□ -1.87
SPT6YGR116W PRM1P53835 661 aa3.35□□□□□ -1.87
SPT6YGR116W POM33Q12164 279 aa3.35□□□□□ -1.87
SPT6YGR116W YNR034W-AQ3E841 98 aa3.35□□□□□ -1.87
SPT6YGR116W YIL134C-AQ45U18 67 aa3.35□□□□□ -1.87
SPT6YGR116W RPB5P20434 215 aa3.35□□□□□ -1.87
SPT6YGR116W OLE1P21147 510 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W RNA15P25299 296 aaPredicted RBP3.35□□□□□ -1.87
SPT6YGR116W ALK2P32789 676 aaPredicted RBP3.35□□□□□ -1.87
SPT6YGR116W RRN10P38204 145 aa3.35□□□□□ -1.87
SPT6YGR116W EHT1P38295 451 aa3.35□□□□□ -1.87
SPT6YGR116W IKS1P47042 667 aa3.35□□□□□ -1.87
SPT6YGR116W RMD9P53140 646 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W TYW3P53177 273 aa3.35□□□□□ -1.87
SPT6YGR116W YDR248CQ03786 193 aa3.35□□□□□ -1.87
SPT6YGR116W TAZ1Q06510 381 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms