RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W RBG1P39729 369 aa1.86□□□□□ -2.11
BRP1YGL007W LSM4P40070 187 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W AVT7P40501 490 aa1.86□□□□□ -2.11
BRP1YGL007W ADO1P47143 340 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W LYS20P48570 428 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W TOM22P49334 152 aa1.86□□□□□ -2.11
BRP1YGL007W GPI1P53306 609 aa1.86□□□□□ -2.11
BRP1YGL007W MKC7P53379 596 aa1.86□□□□□ -2.11
BRP1YGL007W DSL1P53847 754 aa1.86□□□□□ -2.11
BRP1YGL007W DUG3P53871 357 aa1.86□□□□□ -2.11
BRP1YGL007W YNL181WP53878 407 aa1.86□□□□□ -2.11
BRP1YGL007W OCA2P53949 197 aa1.86□□□□□ -2.11
BRP1YGL007W TPS1Q00764 495 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W RRN5Q02983 363 aa1.86□□□□□ -2.11
BRP1YGL007W PEX12Q04370 399 aa1.86□□□□□ -2.11
BRP1YGL007W SPC2Q04969 178 aa1.86□□□□□ -2.11
BRP1YGL007W SNT309Q06091 175 aaPredicted RBP1.86□□□□□ -2.11
BRP1YGL007W BCP1Q06338 283 aa1.86□□□□□ -2.11
BRP1YGL007W RRP9Q06506 573 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W YPR147CQ06522 304 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W IRC19Q07843 230 aa1.86□□□□□ -2.11
BRP1YGL007W COQ10Q08058 207 aa1.86□□□□□ -2.11
BRP1YGL007W RSA1Q08932 381 aa1.86□□□□□ -2.11
BRP1YGL007W NIP7Q08962 181 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W ULA1Q12059 462 aa1.86□□□□□ -2.11
BRP1YGL007W VAM3Q12241 283 aa1.86□□□□□ -2.11
BRP1YGL007W APC2Q12440 853 aa1.86□□□□□ -2.11
BRP1YGL007W PFK27Q12471 397 aaPredicted RBP1.86□□□□□ -2.11
BRP1YGL007W YHR214C-EQ8TGK0 99 aa1.86□□□□□ -2.11
BRP1YGL007W Q0297Q9ZZV8 51 aa1.86□□□□□ -2.11
BRP1YGL007W TIM9O74700 87 aa1.85□□□□□ -2.11
BRP1YGL007W RPL6BP05739 176 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W RAD52P06778 471 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W RPC40P07703 335 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W PRB1P09232 635 aa1.85□□□□□ -2.11
BRP1YGL007W SPS4P09937 338 aa1.85□□□□□ -2.11
BRP1YGL007W YOL162WP0CF19 215 aa1.85□□□□□ -2.11
BRP1YGL007W RNA1P11745 407 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W DPM1P14020 267 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W SAG1P20840 650 aa1.85□□□□□ -2.11
BRP1YGL007W CNA1P23287 553 aa1.85□□□□□ -2.11
BRP1YGL007W EXG1P23776 448 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W RHB1P25378 209 aa1.85□□□□□ -2.11
BRP1YGL007W RPS2P25443 254 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W PEX3P28795 441 aa1.85□□□□□ -2.11
BRP1YGL007W CAM1P29547 415 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W ITR1P30605 584 aa1.85□□□□□ -2.11
BRP1YGL007W NTG1P31378 399 aa1.85□□□□□ -2.11
BRP1YGL007W DPH5P32469 300 aaPredicted RBP1.85□□□□□ -2.11
BRP1YGL007W GDH2P33327 1092 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W PAD1P33751 242 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
BRP1YGL007W JEN1P36035 616 aa1.85□□□□□ -2.11
BRP1YGL007W YKL071WP36086 256 aa1.85□□□□□ -2.11
BRP1YGL007W MRPL4P36517 319 aa1.85□□□□□ -2.11
BRP1YGL007W PDX3P38075 228 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W FZO1P38297 855 aa1.85□□□□□ -2.11
BRP1YGL007W ARN2P38724 620 aa1.85□□□□□ -2.11
BRP1YGL007W ISC1P40015 477 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W KRE29P40026 464 aa1.85□□□□□ -2.11
BRP1YGL007W YER084WP40057 128 aa1.85□□□□□ -2.11
BRP1YGL007W RTT105P40063 208 aa1.85□□□□□ -2.11
BRP1YGL007W PRE6P40303 254 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W VHS2P40463 436 aa1.85□□□□□ -2.11
BRP1YGL007W SAS2P40963 338 aa1.85□□□□□ -2.11
BRP1YGL007W IDP2P41939 412 aa1.85□□□□□ -2.11
BRP1YGL007W GCN20P43535 752 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W AGP3P43548 558 aa1.85□□□□□ -2.11
BRP1YGL007W TAX4P47030 604 aa1.85□□□□□ -2.11
BRP1YGL007W EFM3P47163 339 aa1.85□□□□□ -2.11
BRP1YGL007W HMS2P47175 358 aa1.85□□□□□ -2.11
BRP1YGL007W BAT2P47176 376 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W MRK1P50873 501 aa1.85□□□□□ -2.11
BRP1YGL007W PKP2P53170 491 aa1.85□□□□□ -2.11
BRP1YGL007W SMM1P53720 384 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W YNR062CP53748 327 aa1.85□□□□□ -2.11
BRP1YGL007W YNL095CP53932 642 aa1.85□□□□□ -2.11
BRP1YGL007W RPL6AQ02326 176 aaKnown RBP1.85□□□□□ -2.11
BRP1YGL007W DCS1Q06151 350 aa1.85□□□□□ -2.11
BRP1YGL007W POS5Q06892 414 aa1.85□□□□□ -2.11
BRP1YGL007W MIM1Q08176 113 aa1.85□□□□□ -2.11
BRP1YGL007W HRT1Q08273 121 aa1.85□□□□□ -2.11
BRP1YGL007W SKI7Q08491 747 aaPredicted RBP1.85□□□□□ -2.11
BRP1YGL007W GEP3Q08622 556 aa1.85□□□□□ -2.11
BRP1YGL007W YDL180WQ12301 547 aa1.85□□□□□ -2.11
BRP1YGL007W MES1P00958 751 aaKnown RBP1.84□□□□□ -2.11
BRP1YGL007W RPS16AP0CX51 143 aaKnown RBP1.84□□□□□ -2.11
BRP1YGL007W RPS16BP0CX52 143 aaKnown RBP1.84□□□□□ -2.11
BRP1YGL007W PMR1P13586 950 aa1.84□□□□□ -2.11
BRP1YGL007W TAL1P15019 335 aaKnown RBP1.84□□□□□ -2.11
BRP1YGL007W CLB2P24869 491 aa1.84□□□□□ -2.11
BRP1YGL007W GIT1P25346 518 aa1.84□□□□□ -2.11
BRP1YGL007W PPA2P28239 310 aa1.84□□□□□ -2.11
BRP1YGL007W ASF2P32448 525 aaPredicted RBP1.84□□□□□ -2.11
BRP1YGL007W APE2P32454 952 aaKnown RBP1.84□□□□□ -2.11
BRP1YGL007W PRP21P32524 280 aaPredicted RBP1.84□□□□□ -2.11
BRP1YGL007W MRPL6P32904 214 aa1.84□□□□□ -2.11
BRP1YGL007W ARC19P33204 171 aaKnown RBP1.84□□□□□ -2.11
BRP1YGL007W RIB7P33312 244 aa1.84□□□□□ -2.11
BRP1YGL007W NUF2P33895 451 aa1.84□□□□□ -2.11
BRP1YGL007W YBR220CP38318 560 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms