RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	GPA2	P10823	449 aa		0.77	□□□□□ -2.29
UBP3	YER151C	RED1	P14291	827 aa		0.77	□□□□□ -2.29
UBP3	YER151C	CAM1	P29547	415 aa	Known RBP	0.77	□□□□□ -2.29
UBP3	YER151C	ITR1	P30605	584 aa		0.77	□□□□□ -2.29
UBP3	YER151C	SNC1	P31109	117 aa		0.77	□□□□□ -2.29
UBP3	YER151C	ATP11	P32453	318 aa		0.77	□□□□□ -2.29
UBP3	YER151C	SPO23	P33757	523 aa		0.77	□□□□□ -2.29
UBP3	YER151C	SHP1	P34223	423 aa		0.77	□□□□□ -2.29
UBP3	YER151C	RPL32	P38061	130 aa	Known RBP	0.77	□□□□□ -2.29
UBP3	YER151C	LAG1	P38703	411 aa		0.77	□□□□□ -2.29
UBP3	YER151C	WSS1	P38838	269 aa		0.77	□□□□□ -2.29
UBP3	YER151C	MTC6	P38849	526 aa		0.77	□□□□□ -2.29
UBP3	YER151C	GDI1	P39958	451 aa	Known RBP	0.77	□□□□□ -2.29
UBP3	YER151C	PRE5	P40302	234 aa	Known RBP	0.77	□□□□□ -2.29
UBP3	YER151C	SLM1	P40485	686 aa		0.77	□□□□□ -2.29
UBP3	YER151C	CAK1	P43568	368 aa	Predicted RBP	0.77	□□□□□ -2.29
UBP3	YER151C	IRC6	P43615	237 aa		0.77	□□□□□ -2.29
UBP3	YER151C	YGL101W	P53144	215 aa		0.77	□□□□□ -2.29
UBP3	YER151C	HST1	P53685	503 aa		0.77	□□□□□ -2.29
UBP3	YER151C	TRM112	P53738	135 aa	Predicted RBP	0.77	□□□□□ -2.29
UBP3	YER151C	YMR099C	Q03161	297 aa	Known RBP	0.77	□□□□□ -2.29
UBP3	YER151C	YOL075C	Q08234	1294 aa		0.77	□□□□□ -2.29
UBP3	YER151C	NKP1	Q12493	238 aa		0.77	□□□□□ -2.29
UBP3	YER151C	Q0017	Q9ZZX8	53 aa		0.77	□□□□□ -2.29
UBP3	YER151C	DEG1	P31115	442 aa	Known RBP	0.76	□□□□□ -2.29
UBP3	YER151C	ARO7	P32178	256 aa		0.76	□□□□□ -2.29
UBP3	YER151C	MRP49	P32388	137 aa		0.76	□□□□□ -2.29
UBP3	YER151C	SSO1	P32867	290 aa		0.76	□□□□□ -2.29
UBP3	YER151C	ANR2	P36090	516 aa	Predicted RBP	0.76	□□□□□ -2.29
UBP3	YER151C	SWD3	P38123	315 aa		0.76	□□□□□ -2.29
UBP3	YER151C	MNN9	P39107	395 aa	Known RBP	0.76	□□□□□ -2.29
UBP3	YER151C	SPO73	P40031	143 aa		0.76	□□□□□ -2.29
UBP3	YER151C	RFC4	P40339	323 aa	Known RBP	0.76	□□□□□ -2.29
UBP3	YER151C	AGP3	P43548	558 aa		0.76	□□□□□ -2.29
UBP3	YER151C	RSM27	P53305	110 aa		0.76	□□□□□ -2.29
UBP3	YER151C	TIM10	P87108	93 aa		0.76	□□□□□ -2.29
UBP3	YER151C	NCE101	Q02820	53 aa		0.76	□□□□□ -2.29
UBP3	YER151C	GOT1	Q03554	138 aa		0.76	□□□□□ -2.29
UBP3	YER151C	RPN9	Q04062	393 aa	Known RBP	0.76	□□□□□ -2.29
UBP3	YER151C	SMP3	Q04174	516 aa		0.76	□□□□□ -2.29
UBP3	YER151C	VBA1	Q04301	562 aa		0.76	□□□□□ -2.29
UBP3	YER151C	SNT309	Q06091	175 aa	Predicted RBP	0.76	□□□□□ -2.29
UBP3	YER151C	YDL241W	Q07738	123 aa		0.76	□□□□□ -2.29
UBP3	YER151C	SKI7	Q08491	747 aa	Predicted RBP	0.76	□□□□□ -2.29
UBP3	YER151C	YOR387C	Q08910	206 aa		0.76	□□□□□ -2.29
UBP3	YER151C	APL4	Q12028	832 aa		0.76	□□□□□ -2.29
UBP3	YER151C	MSH5	Q12175	901 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YCR075W-A	Q3E830	75 aa		0.76	□□□□□ -2.29
UBP3	YER151C	NUM1	Q00402	2748 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YDR157W	A0A023PZE8	133 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YFR010W-A	P0C5N0	62 aa		0.76	□□□□□ -2.29
UBP3	YER151C	FBA1	P14540	359 aa	Known RBP	0.76	□□□□□ -2.29
UBP3	YER151C	IFM1	P25038	676 aa		0.76	□□□□□ -2.29
UBP3	YER151C	DAL2	P25335	343 aa		0.76	□□□□□ -2.29
UBP3	YER151C	DCC1	P25559	380 aa		0.76	□□□□□ -2.29
UBP3	YER151C	FUN19	P28003	413 aa	Predicted RBP	0.76	□□□□□ -2.29
UBP3	YER151C	PTH2	P34222	208 aa		0.76	□□□□□ -2.29
UBP3	YER151C	ZRT3	P34240	503 aa		0.76	□□□□□ -2.29
UBP3	YER151C	TMA19	P35691	167 aa	Known RBP	0.76	□□□□□ -2.29
UBP3	YER151C	PMU1	P36069	295 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YBR137W	P38276	179 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YEL028W	P39989	153 aa		0.76	□□□□□ -2.29
UBP3	YER151C	SPI1	P40092	148 aa		0.76	□□□□□ -2.29
UBP3	YER151C	IDP2	P41939	412 aa		0.76	□□□□□ -2.29
UBP3	YER151C	TIS11	P47977	285 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YHP1	Q04116	353 aa		0.76	□□□□□ -2.29
UBP3	YER151C	HOR7	Q05827	59 aa		0.76	□□□□□ -2.29
UBP3	YER151C	PSR2	Q07949	397 aa		0.76	□□□□□ -2.29
UBP3	YER151C	YDL009C	Q12210	107 aa		0.76	□□□□□ -2.29
UBP3	YER151C	QCR6	P00127	147 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SOD1	P00445	154 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	RPL20A	P0CX23	172 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	RPL20B	P0CX24	172 aa	Predicted RBP	0.75	□□□□□ -2.29
UBP3	YER151C	ART10	P18634	518 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	OLE1	P21147	510 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	YPS1	P32329	569 aa		0.75	□□□□□ -2.29
UBP3	YER151C	QRI5	P32344	111 aa		0.75	□□□□□ -2.29
UBP3	YER151C	NFU1	P32860	256 aa		0.75	□□□□□ -2.29
UBP3	YER151C	MRPL6	P32904	214 aa		0.75	□□□□□ -2.29
UBP3	YER151C	VPS17	P32913	551 aa		0.75	□□□□□ -2.29
UBP3	YER151C	YKR015C	P36111	568 aa		0.75	□□□□□ -2.29
UBP3	YER151C	VPS51	P36116	164 aa		0.75	□□□□□ -2.29
UBP3	YER151C	APE4	P38821	490 aa		0.75	□□□□□ -2.29
UBP3	YER151C	PTH1	P38876	190 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	GTO1	P48239	356 aa		0.75	□□□□□ -2.29
UBP3	YER151C	AVT4	P50944	713 aa		0.75	□□□□□ -2.29
UBP3	YER151C	PMT5	P52867	743 aa		0.75	□□□□□ -2.29
UBP3	YER151C	VEL1	P53058	206 aa		0.75	□□□□□ -2.29
UBP3	YER151C	YGR067C	P53243	804 aa		0.75	□□□□□ -2.29
UBP3	YER151C	DUG3	P53871	357 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SHR3	Q02774	210 aa		0.75	□□□□□ -2.29
UBP3	YER151C	PRP3	Q03338	469 aa	Predicted RBP	0.75	□□□□□ -2.29
UBP3	YER151C	TAF11	Q04226	346 aa		0.75	□□□□□ -2.29
UBP3	YER151C	ASA1	Q06822	443 aa		0.75	□□□□□ -2.29
UBP3	YER151C	FDH1	Q08911	376 aa		0.75	□□□□□ -2.29
UBP3	YER151C	YPS3	Q12303	508 aa		0.75	□□□□□ -2.29
UBP3	YER151C	CDC39	P25655	2108 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	ADH2	P00331	348 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	ARG4	P04076	463 aa	Predicted RBP	0.75	□□□□□ -2.29
UBP3	YER151C	RPS18A	P0CX55	146 aa	Known RBP	0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms