RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C LSB1P53281 241 aa1.35□□□□□ -2.19
SMB1YER029C EBS1Q03466 884 aaKnown RBP1.35□□□□□ -2.19
SMB1YER029C SFH1Q06168 426 aa1.35□□□□□ -2.19
SMB1YER029C SMT3Q12306 101 aaKnown RBP1.35□□□□□ -2.19
SMB1YER029C EMC6Q12431 108 aa1.35□□□□□ -2.19
SMB1YER029C YOS9Q99220 542 aa1.35□□□□□ -2.19
SMB1YER029C AI5_BETAQ9ZZX0 354 aa1.35□□□□□ -2.19
SMB1YER029C ADH3P07246 375 aaKnown RBP1.34□□□□□ -2.19
SMB1YER029C SSA3P09435 649 aaKnown RBP1.34□□□□□ -2.19
SMB1YER029C CAM1P29547 415 aaKnown RBP1.34□□□□□ -2.19
SMB1YER029C YOR062CP36025 268 aa1.34□□□□□ -2.19
SMB1YER029C NPT1P39683 429 aaKnown RBP1.34□□□□□ -2.19
SMB1YER029C TIF34P40217 347 aaKnown RBP1.34□□□□□ -2.19
SMB1YER029C AGX1P43567 385 aa1.34□□□□□ -2.19
SMB1YER029C MRX5P47007 382 aa1.34□□□□□ -2.19
SMB1YER029C YJL028WP47062 111 aa1.34□□□□□ -2.19
SMB1YER029C MDM34P53083 459 aa1.34□□□□□ -2.19
SMB1YER029C SWS2P53937 143 aa1.34□□□□□ -2.19
SMB1YER029C SEC10Q06245 871 aa1.34□□□□□ -2.19
SMB1YER029C ARV1Q06541 321 aa1.34□□□□□ -2.19
SMB1YER029C YPL150WQ12152 901 aa1.34□□□□□ -2.19
SMB1YER029C SSK22P25390 1331 aaPredicted RBP1.34□□□□□ -2.2
SMB1YER029C MET16P18408 261 aaPredicted RBP1.33□□□□□ -2.2
SMB1YER029C DPB2P24482 689 aaPredicted RBP1.33□□□□□ -2.2
SMB1YER029C SFC1P33303 322 aa1.33□□□□□ -2.2
SMB1YER029C DRE2P36152 348 aa1.33□□□□□ -2.2
SMB1YER029C ECM13P38195 257 aa1.33□□□□□ -2.2
SMB1YER029C COA1P40452 197 aa1.33□□□□□ -2.2
SMB1YER029C GPI8P49018 411 aa1.33□□□□□ -2.2
SMB1YER029C NBP35P52920 328 aa1.33□□□□□ -2.2
SMB1YER029C RSM10Q03201 203 aa1.33□□□□□ -2.2
SMB1YER029C ATC1Q04005 294 aa1.33□□□□□ -2.2
SMB1YER029C EMI1Q04406 187 aa1.33□□□□□ -2.2
SMB1YER029C PER33Q12144 273 aa1.33□□□□□ -2.2
SMB1YER029C YHR086W-AQ3E746 53 aa1.33□□□□□ -2.2
SMB1YER029C OM45P16547 393 aa1.32□□□□□ -2.2
SMB1YER029C YCR102CP25608 368 aa1.32□□□□□ -2.2
SMB1YER029C MRPL37P36532 105 aa1.32□□□□□ -2.2
SMB1YER029C HEK2P38199 381 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
SMB1YER029C YHL049CP38722 271 aa1.32□□□□□ -2.2
SMB1YER029C YHL026CP38740 315 aa1.32□□□□□ -2.2
SMB1YER029C RTT105P40063 208 aa1.32□□□□□ -2.2
SMB1YER029C MEP1P40260 492 aa1.32□□□□□ -2.2
SMB1YER029C EMC2P47133 292 aaKnown RBP1.32□□□□□ -2.2
SMB1YER029C GMC2Q06201 188 aa1.32□□□□□ -2.2
SMB1YER029C CTR3Q06686 241 aa1.32□□□□□ -2.2
SMB1YER029C GEP5Q12393 293 aa1.32□□□□□ -2.2
SMB1YER029C STH1P32597 1359 aa1.32□□□□□ -2.2
SMB1YER029C SGA1P08019 549 aa1.31□□□□□ -2.2
SMB1YER029C RIB7P33312 244 aa1.31□□□□□ -2.2
SMB1YER029C HSM3P38348 480 aa1.31□□□□□ -2.2
SMB1YER029C TEM1P38987 245 aa1.31□□□□□ -2.2
SMB1YER029C RCY1P39531 840 aa1.31□□□□□ -2.2
SMB1YER029C YJL118WP47022 219 aa1.31□□□□□ -2.2
SMB1YER029C TAD2P47058 250 aa1.31□□□□□ -2.2
SMB1YER029C TIM21P53220 239 aa1.31□□□□□ -2.2
SMB1YER029C OST6Q03723 332 aa1.31□□□□□ -2.2
SMB1YER029C PEX12Q04370 399 aa1.31□□□□□ -2.2
SMB1YER029C COX20Q04935 205 aa1.31□□□□□ -2.2
SMB1YER029C RPL4AP10664 362 aaKnown RBP1.3□□□□□ -2.2
SMB1YER029C SHC1P39000 512 aa1.3□□□□□ -2.2
SMB1YER029C RPL4BP49626 362 aaKnown RBP1.3□□□□□ -2.2
SMB1YER029C NIF3P53081 288 aa1.3□□□□□ -2.2
SMB1YER029C MNT4P53745 580 aa1.3□□□□□ -2.2
SMB1YER029C COX2P00410 251 aa1.29□□□□□ -2.2
SMB1YER029C EBP2P36049 427 aaKnown RBP1.29□□□□□ -2.2
SMB1YER029C SPT8P38915 602 aa1.29□□□□□ -2.2
SMB1YER029C DDI1P40087 428 aa1.29□□□□□ -2.2
SMB1YER029C SMD3P43321 101 aaKnown RBP1.29□□□□□ -2.2
SMB1YER029C KAP114P53067 1004 aa1.29□□□□□ -2.2
SMB1YER029C MAL13P53338 473 aa1.29□□□□□ -2.2
SMB1YER029C MPP6P53725 186 aaPredicted RBP1.29□□□□□ -2.2
SMB1YER029C AAH1P53909 347 aa1.29□□□□□ -2.2
SMB1YER029C PEX10Q05568 337 aa1.29□□□□□ -2.2
SMB1YER029C BOP2Q06150 570 aa1.29□□□□□ -2.2
SMB1YER029C RRP36Q12481 300 aaPredicted RBP1.29□□□□□ -2.2
SMB1YER029C INO80P53115 1489 aa1.29□□□□□ -2.2
SMB1YER029C HIS1P00498 297 aaKnown RBP1.28□□□□□ -2.2
SMB1YER029C RPL24AP04449 155 aaKnown RBP1.28□□□□□ -2.2
SMB1YER029C RNP1P32385 249 aa1.28□□□□□ -2.2
SMB1YER029C SCM4P32564 187 aa1.28□□□□□ -2.2
SMB1YER029C PRM9P39551 298 aa1.28□□□□□ -2.2
SMB1YER029C YJR012CP47087 207 aa1.28□□□□□ -2.2
SMB1YER029C YGL034CP53186 121 aa1.28□□□□□ -2.2
SMB1YER029C SME1Q12330 94 aaPredicted RBP1.28□□□□□ -2.2
SMB1YER029C YPL119C-AQ3E751 87 aa1.28□□□□□ -2.2
SMB1YER029C RAD3P06839 778 aa1.27□□□□□ -2.21
SMB1YER029C MRP1P10662 321 aaKnown RBP1.27□□□□□ -2.21
SMB1YER029C POL30P15873 258 aaKnown RBP1.27□□□□□ -2.21
SMB1YER029C QRI5P32344 111 aa1.27□□□□□ -2.21
SMB1YER029C DOA4P32571 926 aa1.27□□□□□ -2.21
SMB1YER029C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
SMB1YER029C MAL32P38158 584 aa1.27□□□□□ -2.21
SMB1YER029C SLX9P53251 210 aaPredicted RBP1.27□□□□□ -2.21
SMB1YER029C MAL12P53341 584 aa1.27□□□□□ -2.21
SMB1YER029C YPR011CQ12251 326 aa1.27□□□□□ -2.21
SMB1YER029C EMP46Q12396 444 aa1.27□□□□□ -2.21
SMB1YER029C PRS2P38620 318 aaKnown RBP1.26□□□□□ -2.21
SMB1YER029C DSN1P40568 576 aa1.26□□□□□ -2.21
SMB1YER029C ALG11P53954 548 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms