RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W ASF2P32448 525 aaPredicted RBP3.23□□□□□ -1.89
RRP17YDR412W KRE6P32486 720 aa3.23□□□□□ -1.89
RRP17YDR412W CBF5P33322 483 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RRP17YDR412W SPT10P35208 640 aa3.23□□□□□ -1.89
RRP17YDR412W YER085CP40058 173 aa3.23□□□□□ -1.89
RRP17YDR412W PEP8P40335 379 aa3.23□□□□□ -1.89
RRP17YDR412W MSS2P40990 351 aa3.23□□□□□ -1.89
RRP17YDR412W RPL10P41805 221 aaKnown RBP3.23□□□□□ -1.89
RRP17YDR412W BNA6P43619 295 aa3.23□□□□□ -1.89
RRP17YDR412W FMP33P46998 180 aa3.23□□□□□ -1.89
RRP17YDR412W YJL118WP47022 219 aa3.23□□□□□ -1.89
RRP17YDR412W LOH1P47055 219 aa3.23□□□□□ -1.89
RRP17YDR412W STE24P47154 453 aa3.23□□□□□ -1.89
RRP17YDR412W BNS1P50084 137 aa3.23□□□□□ -1.89
RRP17YDR412W CGR1P53188 120 aa3.23□□□□□ -1.89
RRP17YDR412W RPL22BP56628 122 aaKnown RBP3.23□□□□□ -1.89
RRP17YDR412W YMR209CQ03648 457 aa3.23□□□□□ -1.89
RRP17YDR412W RIF2Q06208 395 aa3.23□□□□□ -1.89
RRP17YDR412W GPN3Q06543 272 aa3.23□□□□□ -1.89
RRP17YDR412W YOL024WQ08172 172 aa3.23□□□□□ -1.89
RRP17YDR412W YPL247CQ12523 523 aa3.23□□□□□ -1.89
RRP17YDR412W RGS2Q99188 309 aa3.23□□□□□ -1.89
RRP17YDR412W CDC8P00572 216 aa3.22□□□□□ -1.89
RRP17YDR412W SSC1P0CS90 654 aaKnown RBP3.22□□□□□ -1.89
RRP17YDR412W RPL43AP0CX25 92 aaKnown RBP3.22□□□□□ -1.89
RRP17YDR412W RPL43BP0CX26 92 aa3.22□□□□□ -1.89
RRP17YDR412W NAM2P11325 894 aa3.22□□□□□ -1.89
RRP17YDR412W GPI12P23797 304 aa3.22□□□□□ -1.89
RRP17YDR412W SLM5P25345 492 aaKnown RBP3.22□□□□□ -1.89
RRP17YDR412W ADE1P27616 306 aa3.22□□□□□ -1.89
RRP17YDR412W PHA2P32452 334 aa3.22□□□□□ -1.89
RRP17YDR412W YKR015CP36111 568 aa3.22□□□□□ -1.89
RRP17YDR412W GGC1P38988 300 aa3.22□□□□□ -1.89
RRP17YDR412W JHD2P47156 728 aaPredicted RBP3.22□□□□□ -1.89
RRP17YDR412W TOS2P50078 622 aa3.22□□□□□ -1.89
RRP17YDR412W EFM5P53200 248 aaKnown RBP3.22□□□□□ -1.89
RRP17YDR412W BIO4P53630 237 aa3.22□□□□□ -1.89
RRP17YDR412W COS1P53822 381 aa3.22□□□□□ -1.89
RRP17YDR412W RMI1Q02685 241 aa3.22□□□□□ -1.89
RRP17YDR412W SRL4Q03085 281 aa3.22□□□□□ -1.89
RRP17YDR412W SMP3Q04174 516 aa3.22□□□□□ -1.89
RRP17YDR412W CTS2Q06350 511 aa3.22□□□□□ -1.89
RRP17YDR412W APC9Q12107 265 aa3.22□□□□□ -1.89
RRP17YDR412W RIO1Q12196 484 aaKnown RBP3.22□□□□□ -1.89
RRP17YDR412W TPO4Q12256 659 aa3.22□□□□□ -1.89
RRP17YDR412W ATG34Q12292 412 aa3.22□□□□□ -1.89
RRP17YDR412W APC2Q12440 853 aa3.22□□□□□ -1.89
RRP17YDR412W CSM1P25651 190 aa3.21□□□□□ -1.9
RRP17YDR412W ARC19P33204 171 aaKnown RBP3.21□□□□□ -1.9
RRP17YDR412W RPS27AP35997 82 aaKnown RBP3.21□□□□□ -1.9
RRP17YDR412W CHK1P38147 527 aa3.21□□□□□ -1.9
RRP17YDR412W YMR262WP38430 313 aa3.21□□□□□ -1.9
RRP17YDR412W RPS27BP38711 82 aa3.21□□□□□ -1.9
RRP17YDR412W FMC1P40491 155 aa3.21□□□□□ -1.9
RRP17YDR412W UTP25P40498 721 aaKnown RBP3.21□□□□□ -1.9
RRP17YDR412W YPT32P51996 222 aaKnown RBP3.21□□□□□ -1.9
RRP17YDR412W PRP38Q00723 242 aaPredicted RBP3.21□□□□□ -1.9
RRP17YDR412W VPS60Q03390 229 aa3.21□□□□□ -1.9
RRP17YDR412W COX20Q04935 205 aa3.21□□□□□ -1.9
RRP17YDR412W BUR2Q05949 395 aa3.21□□□□□ -1.9
RRP17YDR412W ASA1Q06822 443 aa3.21□□□□□ -1.9
RRP17YDR412W RAX1Q08760 435 aa3.21□□□□□ -1.9
RRP17YDR412W BTS1Q12051 335 aa3.21□□□□□ -1.9
RRP17YDR412W YPL245WQ12179 454 aaKnown RBP3.21□□□□□ -1.9
RRP17YDR412W RRP42Q12277 265 aaPredicted RBP3.21□□□□□ -1.9
RRP17YDR412W YPR1Q12458 312 aa3.21□□□□□ -1.9
RRP17YDR412W MHT1Q12525 324 aa3.21□□□□□ -1.9
RRP17YDR412W FAS1P07149 2051 aaKnown RBP3.21□□□□□ -1.9
RRP17YDR412W UTP20P35194 2493 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W TDH3P00359 332 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
RRP17YDR412W SPT3P06844 337 aa3.2□□□□□ -1.9
RRP17YDR412W RNA1P11745 407 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W YCR016WP25617 290 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W YCR090CP25654 182 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W ZUO1P32527 433 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W YKL162CP36052 402 aa3.2□□□□□ -1.9
RRP17YDR412W BMT2P38278 337 aa3.2□□□□□ -1.9
RRP17YDR412W PHO89P38361 574 aa3.2□□□□□ -1.9
RRP17YDR412W SMX2P40204 77 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W LYS12P40495 371 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W CUP9P41817 306 aa3.2□□□□□ -1.9
RRP17YDR412W EGT2P42835 1041 aa3.2□□□□□ -1.9
RRP17YDR412W OTU1P43558 301 aa3.2□□□□□ -1.9
RRP17YDR412W MET31Q03081 177 aa3.2□□□□□ -1.9
RRP17YDR412W MMT1Q03218 510 aa3.2□□□□□ -1.9
RRP17YDR412W SSQ1Q05931 657 aaPredicted RBP3.2□□□□□ -1.9
RRP17YDR412W SEC10Q06245 871 aa3.2□□□□□ -1.9
RRP17YDR412W LDS2Q08218 356 aa3.2□□□□□ -1.9
RRP17YDR412W RRP40Q08285 240 aaKnown RBP3.2□□□□□ -1.9
RRP17YDR412W AKR2Q12013 749 aa3.2□□□□□ -1.9
RRP17YDR412W YLR053CQ12026 108 aa3.2□□□□□ -1.9
RRP17YDR412W PRP46Q12417 451 aaPredicted RBP3.2□□□□□ -1.9
RRP17YDR412W YPR064WQ12492 139 aa3.2□□□□□ -1.9
RRP17YDR412W UBA3Q99344 299 aa3.2□□□□□ -1.9
RRP17YDR412W CYR1P08678 2026 aaKnown RBP3.19□□□□□ -1.9
RRP17YDR412W ARF1P11076 181 aaKnown RBP3.19□□□□□ -1.9
RRP17YDR412W MSI1P13712 422 aa3.19□□□□□ -1.9
RRP17YDR412W GCY1P14065 312 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
RRP17YDR412W TAH1P25638 111 aaPredicted RBP3.19□□□□□ -1.9
RRP17YDR412W SUI1P32911 108 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms