RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YGR201CP42936 225 aa1.16□□□□□ -2.22
MSN5YDR335W SFH5P47008 294 aa1.16□□□□□ -2.22
MSN5YDR335W SNX4P47057 423 aa1.16□□□□□ -2.22
MSN5YDR335W MAL13P53338 473 aa1.16□□□□□ -2.22
MSN5YDR335W FYV6P53913 173 aa1.16□□□□□ -2.22
MSN5YDR335W ASI1P54074 624 aa1.16□□□□□ -2.22
MSN5YDR335W CTF19Q02732 369 aa1.16□□□□□ -2.22
MSN5YDR335W RIM13Q03792 727 aa1.16□□□□□ -2.22
MSN5YDR335W SEC10Q06245 871 aa1.16□□□□□ -2.22
MSN5YDR335W NCE102Q12207 173 aaRIP-Chip data1.16□□□□□ -2.22not detected
MSN5YDR335W ARP6Q12509 438 aa1.16□□□□□ -2.22
MSN5YDR335W KGD2P19262 463 aaPredicted RBP1.15□□□□□ -2.23
MSN5YDR335W PEX34P25584 144 aa1.15□□□□□ -2.23
MSN5YDR335W OAC1P32332 324 aa1.15□□□□□ -2.23
MSN5YDR335W YMC2P38087 329 aa1.15□□□□□ -2.23
MSN5YDR335W MRP21P38175 177 aa1.15□□□□□ -2.23
MSN5YDR335W SHG1P38337 142 aa1.15□□□□□ -2.23
MSN5YDR335W EXO1P39875 702 aa1.15□□□□□ -2.23
MSN5YDR335W TES1P41903 349 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W GLR1P41921 483 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W CTK3P46963 296 aaPredicted RBP1.15□□□□□ -2.23
MSN5YDR335W YJR154WP47181 346 aa1.15□□□□□ -2.23
MSN5YDR335W PRP24P49960 444 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W MST27P53176 234 aa1.15□□□□□ -2.23
MSN5YDR335W WSC2P53832 503 aa1.15□□□□□ -2.23
MSN5YDR335W MAK3Q03503 176 aa1.15□□□□□ -2.23
MSN5YDR335W VBA1Q04301 562 aa1.15□□□□□ -2.23
MSN5YDR335W YLR283WQ05867 314 aa1.15□□□□□ -2.23
MSN5YDR335W RPO41P13433 1351 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W CDC8P00572 216 aa1.15□□□□□ -2.23
MSN5YDR335W SIR3P06701 978 aa1.15□□□□□ -2.23
MSN5YDR335W TFS1P14306 219 aa1.15□□□□□ -2.23
MSN5YDR335W EPT1P22140 391 aa1.15□□□□□ -2.23
MSN5YDR335W VPH2P32341 215 aa1.15□□□□□ -2.23
MSN5YDR335W MCR1P36060 302 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W PRY2P36110 329 aa1.15□□□□□ -2.23
MSN5YDR335W OSH3P38713 996 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W SMB1P40018 196 aaKnown RBP1.15□□□□□ -2.23
MSN5YDR335W YER076CP40049 302 aa1.15□□□□□ -2.23
MSN5YDR335W LCP5P40079 357 aaPredicted RBP1.15□□□□□ -2.23
MSN5YDR335W ALG8P40351 577 aa1.15□□□□□ -2.23
MSN5YDR335W ASG7P46993 209 aa1.15□□□□□ -2.23
MSN5YDR335W LCB3P47013 409 aa1.15□□□□□ -2.23
MSN5YDR335W AIM23P47015 356 aa1.15□□□□□ -2.23
MSN5YDR335W JHD2P47156 728 aaPredicted RBP1.15□□□□□ -2.23
MSN5YDR335W TPC1P53257 314 aa1.15□□□□□ -2.23
MSN5YDR335W ARK1P53974 638 aa1.15□□□□□ -2.23
MSN5YDR335W CDC14Q00684 551 aa1.15□□□□□ -2.23
MSN5YDR335W KRE28Q04431 385 aa1.15□□□□□ -2.23
MSN5YDR335W YOL019WQ08157 551 aa1.15□□□□□ -2.23
MSN5YDR335W MDM32Q12171 622 aa1.15□□□□□ -2.23
MSN5YDR335W RGT2Q12300 763 aa1.15□□□□□ -2.23
MSN5YDR335W CDC28P00546 298 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W LDB16P25587 256 aa1.14□□□□□ -2.23
MSN5YDR335W IMP1P28627 190 aa1.14□□□□□ -2.23
MSN5YDR335W TRR1P29509 319 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W PMT2P31382 759 aa1.14□□□□□ -2.23
MSN5YDR335W CAT2P32796 670 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W SPO23P33757 523 aa1.14□□□□□ -2.23
MSN5YDR335W NAT2P37293 288 aa1.14□□□□□ -2.23
MSN5YDR335W ECM13P38195 257 aa1.14□□□□□ -2.23
MSN5YDR335W OM14P38325 134 aa1.14□□□□□ -2.23
MSN5YDR335W YHR035WP38769 630 aa1.14□□□□□ -2.23
MSN5YDR335W YNL208WP40159 199 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W PRE6P40303 254 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W HAC1P41546 238 aa1.14□□□□□ -2.23
MSN5YDR335W GDS1P41913 522 aa1.14□□□□□ -2.23
MSN5YDR335W YJR056CP47115 236 aa1.14□□□□□ -2.23
MSN5YDR335W HOC1P47124 396 aa1.14□□□□□ -2.23
MSN5YDR335W CCC1P47818 322 aa1.14□□□□□ -2.23
MSN5YDR335W YNL040WP53960 456 aaPredicted RBP1.14□□□□□ -2.23
MSN5YDR335W TPS1Q00764 495 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W FSH2Q05015 223 aa1.14□□□□□ -2.23
MSN5YDR335W BNA5Q05979 453 aa1.14□□□□□ -2.23
MSN5YDR335W MFG1Q07684 458 aa1.14□□□□□ -2.23
MSN5YDR335W YOL160WQ08321 113 aa1.14□□□□□ -2.23
MSN5YDR335W BSC1Q12140 328 aa1.14□□□□□ -2.23
MSN5YDR335W YCT1Q12235 531 aa1.14□□□□□ -2.23
MSN5YDR335W GEP5Q12393 293 aa1.14□□□□□ -2.23
MSN5YDR335W YDL199CQ12407 687 aa1.14□□□□□ -2.23
MSN5YDR335W YCL012CQ8J0M4 134 aa1.14□□□□□ -2.23
MSN5YDR335W RPS24AP0CX31 135 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W RPS24BP0CX32 135 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W NHP6AP11632 93 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W CPR1P14832 162 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W RPL16AP26784 199 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W GLC7P32598 312 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W GSP1P32835 219 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W GSP2P32836 220 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W SPC34P36131 295 aa1.14□□□□□ -2.23
MSN5YDR335W MOH1P38191 138 aa1.14□□□□□ -2.23
MSN5YDR335W URA8P38627 578 aaPredicted RBP1.14□□□□□ -2.23
MSN5YDR335W GOS1P38736 223 aa1.14□□□□□ -2.23
MSN5YDR335W COX14P39103 70 aa1.14□□□□□ -2.23
MSN5YDR335W BDH2P39713 417 aa1.14□□□□□ -2.23
MSN5YDR335W SIM1P40472 476 aa1.14□□□□□ -2.23
MSN5YDR335W MAM33P40513 266 aa1.14□□□□□ -2.23
MSN5YDR335W CIN5P40917 295 aa1.14□□□□□ -2.23
MSN5YDR335W OST1P41543 476 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W IRC7P43623 340 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms