RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W IES6P32617 166 aa3.53□□□□□ -1.84
HPR1YDR138W PRP18P33411 251 aaPredicted RBP3.53□□□□□ -1.84
HPR1YDR138W RIB1P38066 345 aa3.53□□□□□ -1.84
HPR1YDR138W ECM8P38246 354 aa3.53□□□□□ -1.84
HPR1YDR138W SHE3P38272 425 aaKnown RBP3.53□□□□□ -1.84
HPR1YDR138W COX14P39103 70 aa3.53□□□□□ -1.84
HPR1YDR138W GVP36P40531 326 aaKnown RBP3.53□□□□□ -1.84
HPR1YDR138W NOP19P53317 196 aaPredicted RBP3.53□□□□□ -1.84
HPR1YDR138W IBD2P53892 351 aa3.53□□□□□ -1.84
HPR1YDR138W DYN2Q02647 92 aa3.53□□□□□ -1.84
HPR1YDR138W LDB18Q07887 179 aa3.53□□□□□ -1.84
HPR1YDR138W MIM1Q08176 113 aa3.53□□□□□ -1.84
HPR1YDR138W YOR376WQ08900 122 aa3.53□□□□□ -1.84
HPR1YDR138W GPM2Q12008 311 aa3.53□□□□□ -1.84
HPR1YDR138W ICT1Q12385 394 aa3.53□□□□□ -1.84
HPR1YDR138W YER078W-AQ3E7A2 54 aa3.53□□□□□ -1.84
HPR1YDR138W CPR1P14832 162 aaKnown RBP3.53□□□□□ -1.85
HPR1YDR138W TFC1P32367 649 aa3.53□□□□□ -1.85
HPR1YDR138W YBR241CP38142 488 aa3.53□□□□□ -1.85
HPR1YDR138W RCK1P38622 512 aa3.53□□□□□ -1.85
HPR1YDR138W YIL067CP40514 678 aa3.53□□□□□ -1.85
HPR1YDR138W PRM10P42946 383 aa3.53□□□□□ -1.85
HPR1YDR138W NCA3P46955 337 aa3.53□□□□□ -1.85
HPR1YDR138W UFD1P53044 361 aa3.53□□□□□ -1.85
HPR1YDR138W ZRG17P53735 605 aa3.53□□□□□ -1.85
HPR1YDR138W YPL150WQ12152 901 aa3.53□□□□□ -1.85
HPR1YDR138W YRA1Q12159 226 aaKnown RBP3.53□□□□□ -1.85
HPR1YDR138W HEM4P06174 275 aa3.52□□□□□ -1.85
HPR1YDR138W RPL16AP26784 199 aaKnown RBP3.52□□□□□ -1.85
HPR1YDR138W PDC2P32896 925 aa3.52□□□□□ -1.85
HPR1YDR138W TAF14P35189 244 aa3.52□□□□□ -1.85
HPR1YDR138W UPS2P35200 230 aa3.52□□□□□ -1.85
HPR1YDR138W CSG2P35206 410 aa3.52□□□□□ -1.85
HPR1YDR138W CHL4P38907 458 aa3.52□□□□□ -1.85
HPR1YDR138W PRM5P40476 318 aa3.52□□□□□ -1.85
HPR1YDR138W SCW4P53334 386 aaKnown RBP3.52□□□□□ -1.85
HPR1YDR138W IMP4P53941 290 aaKnown RBP3.52□□□□□ -1.85
HPR1YDR138W DID2P69771 204 aa3.52□□□□□ -1.85
HPR1YDR138W SRL1Q08673 210 aa3.52□□□□□ -1.85
HPR1YDR138W THP2O13539 261 aaKnown RBP3.51□□□□□ -1.85
HPR1YDR138W YOR304C-AO14468 76 aa3.51□□□□□ -1.85
HPR1YDR138W QCR7P00128 127 aa3.51□□□□□ -1.85
HPR1YDR138W TFS1P14306 219 aa3.51□□□□□ -1.85
HPR1YDR138W CNB1P25296 175 aa3.51□□□□□ -1.85
HPR1YDR138W NUP2P32499 720 aa3.51□□□□□ -1.85
HPR1YDR138W FMP23P38231 175 aa3.51□□□□□ -1.85
HPR1YDR138W YBR096WP38256 230 aa3.51□□□□□ -1.85
HPR1YDR138W NVJ1P38881 321 aa3.51□□□□□ -1.85
HPR1YDR138W ERG28P40030 148 aa3.51□□□□□ -1.85
HPR1YDR138W RPC17P47076 161 aa3.51□□□□□ -1.85
HPR1YDR138W MOG1P47123 218 aa3.51□□□□□ -1.85
HPR1YDR138W CPD1P53314 239 aa3.51□□□□□ -1.85
HPR1YDR138W MSO1P53604 210 aaKnown RBP3.51□□□□□ -1.85
HPR1YDR138W VHS1Q03785 461 aa3.51□□□□□ -1.85
HPR1YDR138W ZEO1Q08245 113 aa3.51□□□□□ -1.85
HPR1YDR138W DCN1Q12395 269 aa3.51□□□□□ -1.85
HPR1YDR138W PIS1P06197 220 aaKnown RBP3.51□□□□□ -1.85
HPR1YDR138W URA6P15700 204 aa3.51□□□□□ -1.85
HPR1YDR138W PRE7P23724 241 aaKnown RBP3.51□□□□□ -1.85
HPR1YDR138W ATG22P25568 528 aa3.51□□□□□ -1.85
HPR1YDR138W TIP20P33891 701 aa3.51□□□□□ -1.85
HPR1YDR138W DER1P38307 211 aa3.51□□□□□ -1.85
HPR1YDR138W PRS2P38620 318 aaKnown RBP3.51□□□□□ -1.85
HPR1YDR138W DFG10P40526 253 aa3.51□□□□□ -1.85
HPR1YDR138W TPN1P53099 579 aa3.51□□□□□ -1.85
HPR1YDR138W YDR476CQ03362 224 aa3.51□□□□□ -1.85
HPR1YDR138W RIF2Q06208 395 aa3.51□□□□□ -1.85
HPR1YDR138W RRP40Q08285 240 aaKnown RBP3.51□□□□□ -1.85
HPR1YDR138W UIP4Q08926 304 aa3.51□□□□□ -1.85
HPR1YDR138W RRP42Q12277 265 aaPredicted RBP3.51□□□□□ -1.85
HPR1YDR138W YCL021W-AQ96VH3 125 aa3.51□□□□□ -1.85
HPR1YDR138W REV3P14284 1504 aa3.5□□□□□ -1.85
HPR1YDR138W GCN3P14741 305 aa3.5□□□□□ -1.85
HPR1YDR138W MIR1P23641 311 aaKnown RBP3.5□□□□□ -1.85
HPR1YDR138W RPL24BP24000 155 aaKnown RBP3.5□□□□□ -1.85
HPR1YDR138W CDC13P32797 924 aaKnown RBP3.5□□□□□ -1.85
HPR1YDR138W SPT4P32914 102 aaPredicted RBP3.5□□□□□ -1.85
HPR1YDR138W TVP38P36164 337 aa3.5□□□□□ -1.85
HPR1YDR138W MIC12P38341 106 aa3.5□□□□□ -1.85
HPR1YDR138W SEO1P39709 593 aa3.5□□□□□ -1.85
HPR1YDR138W PEX22P39718 180 aa3.5□□□□□ -1.85
HPR1YDR138W SER33P40510 469 aa3.5□□□□□ -1.85
HPR1YDR138W EGT2P42835 1041 aa3.5□□□□□ -1.85
HPR1YDR138W YNR066CP53752 436 aa3.5□□□□□ -1.85
HPR1YDR138W YLR036CQ07986 203 aa3.5□□□□□ -1.85
HPR1YDR138W YNG1Q08465 219 aa3.5□□□□□ -1.85
HPR1YDR138W YOR114WQ12219 294 aa3.5□□□□□ -1.85
HPR1YDR138W PCL9Q12477 304 aa3.5□□□□□ -1.85
HPR1YDR138W YLR361C-AQ3E795 98 aa3.5□□□□□ -1.85
HPR1YDR138W RPS18AP0CX55 146 aaKnown RBP3.5□□□□□ -1.85
HPR1YDR138W RPS18BP0CX56 146 aaPredicted RBP3.5□□□□□ -1.85
HPR1YDR138W STE18P18852 110 aa3.5□□□□□ -1.85
HPR1YDR138W RPL16BP26785 198 aaKnown RBP3.5□□□□□ -1.85
HPR1YDR138W MDH3P32419 343 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
HPR1YDR138W CBT1P36038 271 aaPredicted RBP3.5□□□□□ -1.85
HPR1YDR138W ECM31P38122 312 aa3.5□□□□□ -1.85
HPR1YDR138W AIM18P38884 321 aa3.5□□□□□ -1.85
HPR1YDR138W CWC23P52868 283 aaPredicted RBP3.5□□□□□ -1.85
HPR1YDR138W MAL13P53338 473 aa3.5□□□□□ -1.85
HPR1YDR138W CSN9Q03981 162 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms