RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	AIM29	P36154	155 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	TVP38	P36164	337 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	MRPL37	P36532	105 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	ASP1	P38986	381 aa	Predicted RBP	4.22	□□□□□ -1.73
SIR2	YDL042C	HMF1	P40037	129 aa	Known RBP	4.22	□□□□□ -1.73
SIR2	YDL042C	SMD2	Q06217	110 aa	Known RBP	4.22	□□□□□ -1.73
SIR2	YDL042C	YDR524C-B	Q3E6R4	66 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	SNA3	P14359	133 aa		4.21	□□□□□ -1.74
SIR2	YDL042C	DAL81	P21657	970 aa		4.21	□□□□□ -1.74
SIR2	YDL042C	VPH2	P32341	215 aa		4.21	□□□□□ -1.74
SIR2	YDL042C	DED81	P38707	554 aa	Known RBP	4.21	□□□□□ -1.74
SIR2	YDL042C	EDC2	P40023	145 aa	Predicted RBP	4.21	□□□□□ -1.74
SIR2	YDL042C	SMD1	Q02260	146 aa	Predicted RBP	4.21	□□□□□ -1.74
SIR2	YDL042C	DPP1	Q05521	289 aa		4.21	□□□□□ -1.74
SIR2	YDL042C	ARC18	Q05933	178 aa	Known RBP	4.21	□□□□□ -1.74
SIR2	YDL042C	YFL064C	P43540	174 aa		4.2	□□□□□ -1.74
SIR2	YDL042C	CPD1	P53314	239 aa		4.2	□□□□□ -1.74
SIR2	YDL042C	ACT1	P60010	375 aa	Known RBP	4.2	□□□□□ -1.74
SIR2	YDL042C	YMR209C	Q03648	457 aa		4.2	□□□□□ -1.74
SIR2	YDL042C	FUS2	Q05670	677 aa		4.2	□□□□□ -1.74
SIR2	YDL042C	AEP1	P32493	518 aa		4.19	□□□□□ -1.74
SIR2	YDL042C	GCG1	P32656	232 aa	Known RBP	4.19	□□□□□ -1.74
SIR2	YDL042C	TVP23	P38962	199 aa		4.19	□□□□□ -1.74
SIR2	YDL042C	FIS1	P40515	155 aa		4.19	□□□□□ -1.74
SIR2	YDL042C	ASG7	P46993	209 aa		4.19	□□□□□ -1.74
SIR2	YDL042C	RLP24	Q07915	199 aa	Known RBP	4.19	□□□□□ -1.74
SIR2	YDL042C	YOR114W	Q12219	294 aa		4.19	□□□□□ -1.74
SIR2	YDL042C	FKS1	P38631	1876 aa	Known RBP	4.19	□□□□□ -1.74
SIR2	YDL042C	MRPL3	P36516	390 aa		4.19	□□□□□ -1.74
SIR2	YDL042C	MOT1	P32333	1867 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	CUP2	P15315	225 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	YCR025C	P25352	136 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	IMP1	P28627	190 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	PRX1	P34227	261 aa	Known RBP	4.18	□□□□□ -1.74
SIR2	YDL042C	MBA1	P38300	278 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	YIL012W	P40551	113 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	TPN1	P53099	579 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	YDR034W-B	Q6Q5X2	51 aa		4.18	□□□□□ -1.74
SIR2	YDL042C	SUA5	P32579	426 aa		4.17	□□□□□ -1.74
SIR2	YDL042C	RCY1	P39531	840 aa		4.17	□□□□□ -1.74
SIR2	YDL042C	KRE29	P40026	464 aa		4.17	□□□□□ -1.74
SIR2	YDL042C	YIR035C	P40579	254 aa		4.17	□□□□□ -1.74
SIR2	YDL042C	PRP24	P49960	444 aa	Known RBP	4.17	□□□□□ -1.74
SIR2	YDL042C	YNL040W	P53960	456 aa	Predicted RBP	4.17	□□□□□ -1.74
SIR2	YDL042C	VBA1	Q04301	562 aa		4.17	□□□□□ -1.74
SIR2	YDL042C	YLL007C	Q07799	665 aa		4.17	□□□□□ -1.74
SIR2	YDL042C	TCP1	P12612	559 aa	Known RBP	4.16	□□□□□ -1.74
SIR2	YDL042C	TPS2	P31688	896 aa	Known RBP	4.16	□□□□□ -1.74
SIR2	YDL042C	PET100	P38958	111 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	MPP6	P53725	186 aa	Predicted RBP	4.16	□□□□□ -1.74
SIR2	YDL042C	PGA2	P53903	129 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	YPL113C	Q02961	396 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	YAL063C-A	Q3E791	96 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	RPL24A	P04449	155 aa	Known RBP	4.16	□□□□□ -1.74
SIR2	YDL042C	RTC4	P53850	401 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	YML018C	Q03730	393 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	TAF9	Q05027	157 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	GMC2	Q06201	188 aa		4.16	□□□□□ -1.74
SIR2	YDL042C	CSE1	P33307	960 aa		4.15	□□□□□ -1.75
SIR2	YDL042C	SIP3	P38717	1229 aa		4.15	□□□□□ -1.75
SIR2	YDL042C	HYR1	P40581	163 aa	Known RBP	4.15	□□□□□ -1.75
SIR2	YDL042C	COG7	P53195	279 aa		4.15	□□□□□ -1.75
SIR2	YDL042C	ZRG17	P53735	605 aa		4.15	□□□□□ -1.75
SIR2	YDL042C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SIR2	YDL042C	KAP95	Q06142	861 aa	Known RBP	4.15	□□□□□ -1.75
SIR2	YDL042C	RIF1	P29539	1916 aa		4.14	□□□□□ -1.75
SIR2	YDL042C	BMH1	P29311	267 aa	Known RBP	4.14	□□□□□ -1.75
SIR2	YDL042C	FMT1	P32785	401 aa		4.14	□□□□□ -1.75
SIR2	YDL042C	SLX1	P38324	304 aa		4.14	□□□□□ -1.75
SIR2	YDL042C	PET494	P07390	489 aa	Predicted RBP	4.13	□□□□□ -1.75
SIR2	YDL042C	COT1	P32798	439 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	SEN34	P39707	275 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	SCC4	P40090	624 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	AVT7	P40501	490 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	PEX31	P53203	462 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	YPL264C	Q08980	353 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	PRY2	P36110	329 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	IBA57	P47158	497 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	UFD1	P53044	361 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	KAP114	P53067	1004 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	MRS2	Q01926	470 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	SFH1	Q06168	426 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	DDP1	Q99321	188 aa	Known RBP	4.13	□□□□□ -1.75
SIR2	YDL042C	UBR2	Q07963	1872 aa		4.13	□□□□□ -1.75
SIR2	YDL042C	RPL22A	P05749	121 aa	Known RBP	4.12	□□□□□ -1.75
SIR2	YDL042C	MET16	P18408	261 aa	Predicted RBP	4.12	□□□□□ -1.75
SIR2	YDL042C	DRE2	P36152	348 aa		4.12	□□□□□ -1.75
SIR2	YDL042C	MRX3	P38172	270 aa		4.12	□□□□□ -1.75
SIR2	YDL042C	YHL026C	P38740	315 aa		4.12	□□□□□ -1.75
SIR2	YDL042C	PFS2	P42841	465 aa	Known RBP	4.12	□□□□□ -1.75
SIR2	YDL042C	CDC42	P19073	191 aa		4.11	□□□□□ -1.75
SIR2	YDL042C	AST1	P35183	429 aa		4.11	□□□□□ -1.75
SIR2	YDL042C	COS4	P43542	379 aa		4.11	□□□□□ -1.75
SIR2	YDL042C	NBP1	P52919	319 aa	Predicted RBP	4.11	□□□□□ -1.75
SIR2	YDL042C	VPS60	Q03390	229 aa		4.11	□□□□□ -1.75
SIR2	YDL042C	RPS3	P05750	240 aa	Known RBP	4.1	□□□□□ -1.75
SIR2	YDL042C	POF1	P25576	258 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	ARO4	P32449	370 aa	Known RBP	4.1	□□□□□ -1.75
SIR2	YDL042C	HSM3	P38348	480 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	COA1	P40452	197 aa		4.1	□□□□□ -1.75

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