RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	BOL2	P53082	120 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	MDM34	P53083	459 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	VPS73	P53142	486 aa	Known RBP	4.09	□□□□□ -1.75
VBA2	YBR293W	YNR066C	P53752	436 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	RSM23	Q01163	450 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	IRC15	Q02733	499 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	YMR315W	Q04869	349 aa	Known RBP	4.09	□□□□□ -1.75
VBA2	YBR293W	BLS1	Q06071	122 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	PEX30	Q06169	523 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	YLR455W	Q06188	304 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	BTS1	Q12051	335 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	YJR112W-A	Q3E743	109 aa		4.09	□□□□□ -1.75
VBA2	YBR293W	QCR7	P00128	127 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	NHP6A	P11632	93 aa	Known RBP	4.08	□□□□□ -1.76
VBA2	YBR293W	POP5	P28005	173 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	TCD2	P36101	447 aa	Known RBP	4.08	□□□□□ -1.76
VBA2	YBR293W	MRP21	P38175	177 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	SHE1	P38200	338 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	CTF8	P38877	133 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	PEX7	P39108	375 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	LRO1	P40345	661 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	OPT1	P40897	799 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	STE24	P47154	453 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	IBA57	P47158	497 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	EXG2	P52911	562 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	YIF1	P53845	314 aa	Known RBP	4.08	□□□□□ -1.76
VBA2	YBR293W	CDC14	Q00684	551 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	SPC19	Q03954	165 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	GMC1	Q04399	608 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	YML096W	Q04489	525 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	GIM5	Q04493	163 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	NAT4	Q04751	285 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	ERP1	Q05359	219 aa	Known RBP	4.08	□□□□□ -1.76
VBA2	YBR293W	RNH202	Q05635	350 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	CTS2	Q06350	511 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	BER1	Q06688	274 aa	Known RBP	4.08	□□□□□ -1.76
VBA2	YBR293W	GUD1	Q07729	489 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	ATG10	Q07879	167 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	TEN1	Q07921	160 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	LEU9	Q12166	604 aa	Known RBP	4.08	□□□□□ -1.76
VBA2	YBR293W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
VBA2	YBR293W	YLR118C	Q12354	227 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	WIP1	Q2V2P8	89 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	Q0010	Q9ZZX9	128 aa		4.08	□□□□□ -1.76
VBA2	YBR293W	YLR422W	Q06409	1932 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	COX2	P00410	251 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	HIS1	P00498	297 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	STF1	P01098	86 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	PAU19	P0CE85	124 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	PAU21	P0CE86	164 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	PAU22	P0CE87	164 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	PDA1	P16387	420 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	LSB5	P25369	354 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	STP22	P25604	385 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	PAU3	P25610	124 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VBA2	YBR293W	ARO2	P28777	376 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	SSH4	P32343	579 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	SEC17	P32602	292 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	AIM26	P32858	118 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	MTH1	P35198	433 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	YPT53	P36019	220 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	BNA4	P38169	460 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	YBR096W	P38256	230 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	CUE1	P38428	203 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	CHL4	P38907	458 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	AXL2	P38928	823 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	BDH1	P39714	382 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	YIL152W	P40455	235 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	LYS12	P40495	371 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	GZF3	P42944	551 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	YAR1	P46683	200 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	NCS6	P53088	359 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	FLC3	P53121	802 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	APJ1	P53940	528 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	YVH1	Q02256	364 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	YDR415C	Q04033	374 aa	Predicted RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	UTP15	Q04305	513 aa	Known RBP	4.07	□□□□□ -1.76
VBA2	YBR293W	ATG39	Q06159	398 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	KEI1	Q06346	221 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	IPK1	Q06667	281 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	YLR040C	Q07988	224 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	HRD1	Q08109	551 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	PER33	Q12144	273 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	VAM3	Q12241	283 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	ERP3	Q12403	225 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	SLO1	Q3E784	85 aa		4.07	□□□□□ -1.76
VBA2	YBR293W	HKR1	P41809	1802 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	INH1	P01097	85 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	GDH1	P07262	454 aa	Known RBP	4.06	□□□□□ -1.76
VBA2	YBR293W	PHO2	P07269	559 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	RIP1	P08067	215 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	RPS25B	P0C0T4	108 aa	Known RBP	4.06	□□□□□ -1.76
VBA2	YBR293W	SCL1	P21243	252 aa	Known RBP	4.06	□□□□□ -1.76
VBA2	YBR293W	EXG1	P23776	448 aa	Known RBP	4.06	□□□□□ -1.76
VBA2	YBR293W	ADH7	P25377	361 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	BOS1	P25385	244 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	SKN1	P33336	771 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	TIP20	P33891	701 aa		4.06	□□□□□ -1.76
VBA2	YBR293W	PHO11	P35842	467 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms