RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TAS1R3Q7RTX0 852 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 PPFIBP1Q86W92 1011 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 RPGRIP1Q96KN7 1286 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 KLHL5Q96PQ7 755 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 ACO2Q99798 780 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 TARS2Q9BW92 718 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 DZANK1Q9NVP4 752 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 CACNG4Q9UBN1 327 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 SSX2IPQ9Y2D8 614 aa18.41■□□□□ 0.54
CACNA1A-259ENST00000638114 CASTOR2A6NHX0 329 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 SPDYE4A6NLX3 237 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 DCXO43602 365 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 CNPP09543 421 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 ALADP13716 330 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 PLCG1P19174 1290 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 STRN3Q13033 797 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 HSP90AA2PQ14568 343 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 KARSQ15046 597 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 RARS2Q5T160 578 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 KIAA1841Q6NSI8 718 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 CES5AQ6NT32 575 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 FUT10Q6P4F1 479 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 GPBP1Q86WP2 473 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 RNF168Q8IYW5 571 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 SPIRE2Q8WWL2 714 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 PAAF1Q9BRP4 392 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 CDT1Q9H211 546 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 CXCL16Q9H2A7 254 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 KCNG1Q9UIX4 513 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 ADAM28Q9UKQ2 775 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 MTMR6Q9Y217 621 aa18.4■□□□□ 0.54
CACNA1A-259ENST00000638114 FAM86C2PA6NEL3 165 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 LILRB3O75022 631 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 TADA2AO75478 443 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 EFEMP2O95967 443 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 MARCKSP29966 332 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 CEBPZQ03701 1054 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 ITIH3Q06033 890 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 PTPAQ15257 358 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 ARSHQ5FYA8 562 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 TMEM31Q5JXX7 168 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 ZBTB33Q86T24 672 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 RNF135Q8IUD6 432 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 C12orf76Q8N812 135 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 CEP120Q8N960 986 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 LRRC15Q8TF66 581 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 HASPINQ8TF76 798 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 NTPCRQ9BSD7 190 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 TCHPQ9BT92 498 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 GPR62Q9BZJ7 368 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 ADAM7Q9H2U9 754 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 LARSQ9P2J5 1176 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 CDH22Q9UJ99 828 aa18.39■□□□□ 0.53
CACNA1A-259ENST00000638114 LOC730098B7Z3J9 87 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 STX6O43752 255 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 HARSP12081 509 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 GRM5P41594 1212 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 CLCN4P51793 760 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 YARSP54577 528 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 OSTNP61366 133 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 DSG1Q02413 1049 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 MCM6Q14566 821 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 USP41Q3LFD5 358 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 GLRA4Q5JXX5 417 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 SPECC1Q5M775 1068 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 KIAA0319Q5VV43 1072 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 TMEM161BQ8NDZ6 487 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 RAD54LQ92698 747 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 SNX21Q969T3 373 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 B3GALT6Q96L58 329 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 FBXL18Q96ME1 805 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 BLOC1S4Q9NUP1 217 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 MUTYHQ9UIF7 546 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 SF3B1O75533 1304 aaKnown RBP eCLIP18.38■□□□□ 0.53
CACNA1A-259ENST00000638114 TEX28O15482 410 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 FAM13AO94988 1023 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 KIF4AO95239 1232 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 KRT18P05783 430 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 ADH1AP07327 375 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 WEE2P0C1S8 567 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 MAPTP10636 758 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 MCF2P10911 925 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 COL9A1P20849 921 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 SP100P23497 879 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 NAB2Q15742 525 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 KANK3Q6NY19 840 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 MPZL3Q6UWV2 235 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 HSCBQ8IWL3 235 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 EPSTI1Q96J88 318 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 RIPOR3Q96MK2 946 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 NECTIN4Q96NY8 510 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 LRFN3Q9BTN0 628 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 CCSER1Q9C0I3 900 aa18.37■□□□□ 0.53
CACNA1A-259ENST00000638114 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms