RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 TAF1CQ15572 869 aaPredicted RBP15.39■□□□□ 0.05
LIMS4-204ENST00000632897 ARHGAP44Q17R89 818 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 C15orf39Q6ZRI6 1047 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 SV2AQ7L0J3 742 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 RSRC2Q7L4I2 434 aaKnown RBP15.39■□□□□ 0.05
LIMS4-204ENST00000632897 ENOSF1Q7L5Y1 443 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 LRRC71Q8N4P6 559 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 RNF149Q8NC42 400 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 SLC30A5Q8TAD4 765 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 AFG1LQ8WV93 481 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 SEMA4DQ92854 862 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 RAB20Q9NX57 234 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 CAPN6Q9Y6Q1 641 aa15.39■□□□□ 0.05
LIMS4-204ENST00000632897 A0A0A6YYK5 440 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 DDX3XO00571 662 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 H2AFZP0C0S5 128 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 DLATP10515 647 aaKnown RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 NLRP11P59045 1033 aaKnown RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 CKAP4Q07065 602 aaKnown RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 MAP2K5Q13163 448 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 NAA30Q147X3 362 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 ERCC6LQ2NKX8 1250 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 EFCAB12Q6NXP0 572 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 CRELD2Q6UXH1 353 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 H2AFVQ71UI9 128 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 NPLOC4Q8TAT6 608 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 TAS1R2Q8TE23 839 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 HAPLN2Q9GZV7 340 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 RNPEPQ9H4A4 650 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 TOPORSQ9NS56 1045 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 RBAKQ9NYW8 714 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 ANKFY1Q9P2R3 1169 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 CPA4Q9UI42 421 aa15.38■□□□□ 0.05
LIMS4-204ENST00000632897 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
LIMS4-204ENST00000632897 PDE4DIPQ5VU43 2346 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 ENC1O14682 589 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 CLDN3O15551 220 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 EDN1P05305 212 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 HOXC6P09630 235 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 PNMA6AP0CW24 399 aaPredicted RBP15.37■□□□□ 0.05
LIMS4-204ENST00000632897 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 INSRRP14616 1297 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 SMPD1P17405 629 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 AP3M2P53677 418 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 PTENP60484 403 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 RBM10P98175 930 aaKnown RBP15.37■□□□□ 0.05
LIMS4-204ENST00000632897 GCNT1Q02742 428 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 GJC2Q5T442 439 aaPredicted RBP15.37■□□□□ 0.05
LIMS4-204ENST00000632897 RHPN2Q8IUC4 686 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 FAM71AQ8IYT1 594 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 OR6J1Q8NGC5 347 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 OLIG1Q8TAK6 271 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 TRAPPC12Q8WVT3 735 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 SHC3Q92529 594 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 ZBTB45Q96K62 511 aaPredicted RBP15.37■□□□□ 0.05
LIMS4-204ENST00000632897 POP1Q99575 1024 aaKnown RBP15.37■□□□□ 0.05
LIMS4-204ENST00000632897 CGRRF1Q99675 332 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 ACO2Q99798 780 aaKnown RBP15.37■□□□□ 0.05
LIMS4-204ENST00000632897 C16orf70Q9BSU1 422 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 FZD8Q9H461 694 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 SALL4Q9UJQ4 1053 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 SNX12Q9UMY4 172 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 PCDHGC5Q9Y5F6 944 aa15.37■□□□□ 0.05
LIMS4-204ENST00000632897 ZSWIM8A7E2V4 1837 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 CTAGE15A4D2H0 777 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 ACKR2O00590 384 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 LRRN2O75325 713 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 CTAGE8P0CG41 777 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 TCP1P17987 556 aaKnown RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 TNFAIP3P21580 790 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 KLRC1P26715 233 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 PHKA2P46019 1235 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 ACOT2P49753 483 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 NAP1L1P55209 391 aaKnown RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 MCL1Q07820 350 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 SURF1Q15526 300 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 ZACNQ401N2 412 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 TSHZ1Q6ZSZ6 1077 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 CTAGE6Q86UF2 777 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 BRSK2Q8IWQ3 736 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 CTAGE4Q8IX94 777 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 PPM1KQ8N3J5 372 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 LINC01465Q8N7H1 131 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 LNX1Q8TBB1 728 aaPredicted RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 U2AF1L4Q8WU68 220 aaKnown RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 RPGRIP1Q96KN7 1286 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 KREMEN1Q96MU8 473 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 AGPAT1Q99943 283 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 PACSIN1Q9BY11 444 aa15.36■□□□□ 0.05
LIMS4-204ENST00000632897 ZHX1Q9UKY1 873 aaPredicted RBP15.36■□□□□ 0.05
LIMS4-204ENST00000632897 CNTNAP2Q9UHC6 1331 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms