RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 RNF168Q8IYW5 571 aaPredicted RBP11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 LPPQ93052 612 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 MSANTD3Q96H12 275 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 TRMT61BQ9BVS5 477 aaKnown RBP11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 MRS2Q9HD23 443 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 TOMM22Q9NS69 142 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 GDE1Q9NZC3 331 aa11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 URB1O60287 2271 aaKnown RBP11.67□□□□□ -0.54
AP003900.1-202ENST00000616952 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 CCL16O15467 120 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 PPP1R11O60927 126 aaPredicted RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 XYLBO75191 536 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 LMAN2Q12907 356 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 KARSQ15046 597 aaKnown RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 LONRF3Q496Y0 759 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 PABPC1LQ4VXU2 614 aaKnown RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 COLEC12Q5KU26 742 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 C1orf228Q6PIY5 440 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 PCSK4Q6UW60 755 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 NLRX1Q86UT6 975 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 ZNF513Q8N8E2 541 aaPredicted RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 KBTBD3Q8NAB2 608 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 KIF1BPQ96EK5 621 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 MCRS1Q96EZ8 462 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 FCRL3Q96P31 734 aaPredicted RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 VAT1LQ9HCJ6 419 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 MARCH5Q9NX47 278 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 FBXW11Q9UKB1 542 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 NOTCH2Q04721 2471 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 FBN2P35556 2912 aa11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 ASCC3Q8N3C0 2202 aaKnown RBP11.66□□□□□ -0.54
AP003900.1-202ENST00000616952 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 NRP1O14786 923 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 C8AP07357 584 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 GDI1P31150 447 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 HOXA9P31269 272 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 PHKA2P46019 1235 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 CCR10P46092 362 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 ASPRV1Q53RT3 343 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 PCNX4Q63HM2 1172 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 CEP85Q6P2H3 762 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 PLPPR4Q7Z2D5 763 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 CYP2U1Q7Z449 544 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 TTC14Q96N46 770 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 HCFC1R1Q9NWW0 138 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 PKD2L1Q9P0L9 805 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 FAN1Q9Y2M0 1017 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 MRPS23Q9Y3D9 190 aaKnown RBP11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 PCDHB15Q9Y5E8 787 aa11.65□□□□□ -0.54
AP003900.1-202ENST00000616952 COL5A1P20908 1838 aaPredicted RBP11.65□□□□□ -0.55
AP003900.1-202ENST00000616952 B4E1Z4 1266 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 DCLK1O15075 740 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 DGAT1O75907 488 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 DDHD2O94830 711 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 EFEMP2O95967 443 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 ALDH2P05091 517 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 ZFYP08048 801 aaPredicted RBP11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 FGRP09769 529 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 EIF4BP23588 611 aaKnown RBP11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 CSRP3P50461 194 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 MLLT6P55198 1093 aaPredicted RBP11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 RIPPLY3P57055 190 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 PDXDC1Q6P996 788 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 URGCPQ8TCY9 931 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 GPRASP2Q96D09 838 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 CDHR1Q96JP9 859 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 FNIP2Q9P278 1114 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 EVLQ9UI08 416 aaPredicted RBP11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 COL1A2P08123 1366 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 ZMYM2Q9UBW7 1377 aa11.64□□□□□ -0.55
AP003900.1-202ENST00000616952 TEX51A0A1B0GUA7 166 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 B8ZZF3 427 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 FOXP2O15409 715 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 OFD1O75665 1012 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 C22orf31O95567 290 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 POU2F2P09086 479 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 FTH1P19P0C7X4 201 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 PSMC3P17980 439 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 RPL17P18621 184 aaKnown RBP11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 ITPKBP27987 946 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 GBP1P32455 592 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 STAT5BP51692 787 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 CYP4F3Q08477 520 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 CCINQ13939 588 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 HNRNPDQ14103 355 aaKnown RBP11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 SYNPOQ8N3V7 929 aa11.63□□□□□ -0.55
AP003900.1-202ENST00000616952 PNPLA1Q8N8W4 532 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms