RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 LMNTD2Q8IXW0 634 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ZBED8Q8IZ13 594 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PYROXD1Q8WU10 500 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SNF8Q96H20 258 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 GJD4Q96KN9 370 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RAB3IPQ96QF0 476 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PAGR1Q9BTK6 254 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 TMEM39BQ9GZU3 492 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 VCPKMTQ9H867 229 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ZNF277Q9NRM2 450 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 GINM1Q9NU53 330 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 TXNDC16Q9P2K2 825 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PCSK1NQ9UHG2 260 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 MAD1L1Q9Y6D9 718 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RALAP11233 206 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 CNGA1P29973 690 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 PSMC5P62195 406 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SPP2Q13103 211 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RCN2Q14257 317 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 HADHQ16836 314 aaKnown RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ZCWPW2Q504Y3 356 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 OTOP1Q7RTM1 612 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 SPATA21Q7Z572 469 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RFX6Q8HWS3 928 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 THNSL1Q8IYQ7 743 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 TAS1R2Q8TE23 839 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 ALG3Q92685 438 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 TRIM11Q96F44 468 aa7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 DDX23Q9BUQ8 820 aaKnown RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 USP15Q9Y4E8 981 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-206ENST00000610556 INO80B-WBP1J3KQ70 363 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TGFB1I1O43294 461 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RNF8O76064 485 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 GNA15P30679 374 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 HSPA1LP34931 641 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 PHBP35232 272 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 IGBP1P78318 339 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 IRX4P78413 519 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 LMNB2Q03252 620 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC20A2Q08357 652 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TAF11Q15544 211 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SMAD1Q15797 465 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 QPCTQ16769 361 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TSNAXIP1Q2TAA8 658 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 AMIGO3Q86WK7 504 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 PALB2Q86YC2 1186 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 PRPF38AQ8NAV1 312 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SCFD2Q8WU76 684 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 KLF6Q99612 283 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 INO80BQ9C086 356 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 CXorf56Q9H5V9 222 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC24A3Q9HC58 644 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 OLFML3Q9NRN5 406 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 ZHX2Q9Y6X8 837 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 ADAMTS7Q9UKP4 1686 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TRAPPC3O43617 180 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 BAG2O95816 211 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 INHBAP08476 426 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RFX1P22670 979 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 MSH2P43246 934 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 ARSEP51690 589 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 PDIA2Q13087 525 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SPARCL1Q14515 664 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 ASTE1Q2TB18 679 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 P3H1Q32P28 736 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 Q4G0T1 1027 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SEZ6Q53EL9 994 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 PHLDB3Q6NSJ2 640 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 ATL2Q8NHH9 583 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TMEM143Q96AN5 459 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 MXRA8Q9BRK3 442 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 CDC42EP4Q9H3Q1 356 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TBC1D22BQ9NU19 505 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 NOP53Q9NZM5 478 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 FEM1BQ9UK73 627 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 GAKO14976 1311 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 I3L4J1 428 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 NFIBO00712 420 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 DIAPH2O60879 1101 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 LCA5LO95447 670 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RARAP10276 462 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RRM1P23921 792 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 PPP3CAQ08209 521 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 DDR1Q08345 913 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 DRP2Q13474 957 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 CDO1Q16878 200 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 COBLL1Q53SF7 1204 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 MOXD1Q6UVY6 613 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 CENPUQ71F23 418 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RPAINQ86UA6 219 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RHOT1Q8IXI2 618 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 CCDC110Q8TBZ0 833 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 KAT2BQ92831 832 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 TTC17Q96AE7 1141 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms