RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 BBXQ8WY36 941 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-203ENST00000588210 PSMB7Q99436 277 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 GANQ9H2C0 597 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 RBM12Q9NTZ6 932 aaKnown RBP15.85■□□□□ 0.13
CCDC43-203ENST00000588210 SMARCAL1Q9NZC9 954 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 AIPL1Q9NZN9 384 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 LCMT1Q9UIC8 334 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 TBX21Q9UL17 535 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 PCDHGC5Q9Y5F6 944 aa15.85■□□□□ 0.13
CCDC43-203ENST00000588210 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
CCDC43-203ENST00000588210 TRIM43BA6NCK2 446 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 GOLGA6CA6NDK9 693 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 RRN3P2A6NIE6 340 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 GOLGA8KD6RF30 607 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC43-203ENST00000588210 P4HBP07237 508 aaKnown RBP15.84■□□□□ 0.13
CCDC43-203ENST00000588210 GOLGA6DP0CG33 693 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 ATP4AP20648 1035 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 PPFIA1Q13136 1202 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 FOXR1Q6PIV2 292 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 NELFCDQ8IXH7 590 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 TRIM43Q96BQ3 446 aaPredicted RBP15.84■□□□□ 0.13
CCDC43-203ENST00000588210 FAM167AQ96KS9 214 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 SETD4Q9NVD3 440 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 GOLGA6AQ9NYA3 693 aa15.84■□□□□ 0.13
CCDC43-203ENST00000588210 GRID2IPA4D2P6 1211 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 INSRRP14616 1297 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 MATR3P43243 847 aaKnown RBP eCLIP15.83■□□□□ 0.13
CCDC43-203ENST00000588210 SLC12A3P55017 1021 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 PSMC5P62195 406 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 ADAM17P78536 824 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 HIC1Q14526 733 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 HERC4Q5GLZ8 1057 aaPredicted RBP15.83■□□□□ 0.13
CCDC43-203ENST00000588210 ALS2CLQ60I27 953 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 NRBP2Q9NSY0 501 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 TBC1D7Q9P0N9 293 aa15.83■□□□□ 0.13
CCDC43-203ENST00000588210 ZMYND8Q9ULU4 1186 aaPredicted RBP15.83■□□□□ 0.13
CCDC43-203ENST00000588210 OPA1O60313 960 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 EPB41P11171 864 aaKnown RBP15.83■□□□□ 0.12
CCDC43-203ENST00000588210 SYN1P17600 705 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 QARSP47897 775 aaKnown RBP15.83■□□□□ 0.12
CCDC43-203ENST00000588210 SLC7A5Q01650 507 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 PTK7Q13308 1070 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 RAPGEF1Q13905 1077 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 GRIK4Q16099 956 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 ASIC2Q16515 512 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 UGCGQ16739 394 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 BANK1Q8NDB2 785 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 NEK9Q8TD19 979 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 WDR81Q562E7 1941 aa15.83■□□□□ 0.12
CCDC43-203ENST00000588210 KAT6AQ92794 2004 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 COL1A2P08123 1366 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 NPHP3-ACAD11A0A0J9YXS1 232 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 BTNL10A8MVZ5 291 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 H0YGN5 161 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 CETN3O15182 167 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 ZNF862O60290 1169 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 MED24O75448 989 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 PALMO75781 387 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 OATP04181 439 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 CYP2C9P11712 490 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 RAG1P15918 1043 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 NAP1L1P55209 391 aaKnown RBP15.82■□□□□ 0.12
CCDC43-203ENST00000588210 ZNF200P98182 395 aaPredicted RBP15.82■□□□□ 0.12
CCDC43-203ENST00000588210 ZNF484Q5JVG2 852 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 MEI1Q5TIA1 1274 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 EIF2AK1Q9BQI3 630 aaKnown RBP15.82■□□□□ 0.12
CCDC43-203ENST00000588210 RASSF4Q9H2L5 321 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 HIPK3Q9H422 1215 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 GDF3Q9NR23 364 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 PDE4DIPQ5VU43 2346 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 ATP8B3O60423 1300 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 TREHO43280 583 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 TIMP1P01033 207 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 KLRC1P26715 233 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 PRKCEQ02156 737 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 ADAM9Q13443 819 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 BFSP2Q13515 415 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 ARSHQ5FYA8 562 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 XKR3Q5GH77 459 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 GBP6Q6ZN66 633 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 SERINC5Q86VE9 423 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 IFT20Q8IY31 132 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 MS4A14Q96JA4 679 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 HSD17B14Q9BPX1 270 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 TMEM51Q9NW97 253 aa15.82■□□□□ 0.12
CCDC43-203ENST00000588210 A0A087X0T9 212 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 MBLAC1A4D2B0 266 aaPredicted RBP15.81■□□□□ 0.12
CCDC43-203ENST00000588210 CES2O00748 559 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 SLITRK3O94933 977 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 KRT18P05783 430 aaKnown RBP15.81■□□□□ 0.12
CCDC43-203ENST00000588210 FAM228BP0C875 321 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 IGBP1P78318 339 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
CCDC43-203ENST00000588210 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 MARCH8Q5T0T0 291 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 C10orf76Q5T2E6 689 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 TRMT1LQ7Z2T5 733 aaKnown RBP15.81■□□□□ 0.12
CCDC43-203ENST00000588210 FRMD5Q7Z6J6 570 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms