RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 SREBF1P36956 1147 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 ECE1P42892 770 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 TPM4P67936 248 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 CALCRLQ16602 461 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 IFI16Q16666 785 aaKnown RBP7.52□□□□□ -1.21
CDH8-210ENST00000583483 LETM2Q2VYF4 491 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 JAKMIP3Q5VZ66 844 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 ZNF574Q6ZN55 896 aaPredicted RBP7.52□□□□□ -1.21
CDH8-210ENST00000583483 USP50Q70EL3 339 aaPredicted RBP7.52□□□□□ -1.21
CDH8-210ENST00000583483 MIGA2Q7L4E1 593 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 MFSD4AQ8N468 514 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 C4orf32Q8N8J7 132 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 CPLX3Q8WVH0 158 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 COA7Q96BR5 231 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 ANAPC16Q96DE5 110 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 FBXL18Q96ME1 805 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 MBOAT7Q96N66 472 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 WRNIP1Q96S55 665 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 TM9SF2Q99805 663 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 SLF1Q9BQI6 1058 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 PANK2Q9BZ23 570 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 MAP3K20Q9NYL2 800 aaKnown RBP7.52□□□□□ -1.21
CDH8-210ENST00000583483 MRPL11Q9Y3B7 192 aaKnown RBP7.52□□□□□ -1.21
CDH8-210ENST00000583483 KDM3AQ9Y4C1 1321 aa7.52□□□□□ -1.21
CDH8-210ENST00000583483 CYP3A7-CYP3A51PA0A087WV96 503 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 GOLGA6L19H0YKK7 550 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 IKBKBO14920 756 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 POLR2DO15514 142 aaKnown RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 ICAM1P05362 532 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 YBX3P16989 372 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDH8-210ENST00000583483 VCAM1P19320 739 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 CYP3A7P24462 503 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 CIITAP33076 1130 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 NF2P35240 595 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 OAZ1P54368 228 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 SETQ01105 290 aaPredicted RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 ARID5AQ03989 594 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 GRIN1Q05586 938 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 SARM1Q6SZW1 724 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 SPICE1Q8N0Z3 855 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 TAB3Q8N5C8 712 aaPredicted RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 IGSF22Q8N9C0 903 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 PRPF38AQ8NAV1 312 aaKnown RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDH8-210ENST00000583483 SPATA20Q8TB22 786 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 SMARCE1Q969G3 411 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 SLC6A18Q96N87 628 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 GSDMAQ96QA5 445 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 MTMR9Q96QG7 549 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 NUP88Q99567 741 aaPredicted RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 ZFP64Q9NPA5 681 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 RMND1Q9NWS8 449 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 DDX25Q9UHL0 483 aaKnown RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 ASTN2O75129 1339 aaPredicted RBP7.51□□□□□ -1.21
CDH8-210ENST00000583483 FRMPD4Q14CM0 1322 aa7.51□□□□□ -1.21
CDH8-210ENST00000583483 TMEM265A0A087WTH1 108 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 SHISA3A0PJX4 238 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 SMTNL1A8MU46 457 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 BECN2A8MW95 431 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 FAM155AB1AL88 458 aaPredicted RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 GCOM1H8Y6P7 765 aaPredicted RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 MEIS2O14770 477 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 ADAMTS3O15072 1205 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 CYP3A4P08684 503 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 POLR2MP0CAP2 368 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 CD8BP10966 210 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 SRFP11831 508 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 UBA7P41226 1012 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 STAT6P42226 847 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 EPS15P42566 896 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 BACE1P56817 501 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 PDIA5Q14554 519 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 UBE2SQ16763 222 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 LONRF3Q496Y0 759 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 Q4G0T1 1027 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 HAUS3Q68CZ6 603 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 ZNF746Q6NUN9 644 aaPredicted RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 PPFIBP1Q86W92 1011 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 MLKLQ8NB16 471 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 RASSF8Q8NHQ8 419 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 CRYGNQ8WXF5 182 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 DHX58Q96C10 678 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 DCPSQ96C86 337 aaKnown RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 TRIM44Q96DX7 344 aaPredicted RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 CALML4Q96GE6 196 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDH8-210ENST00000583483 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDH8-210ENST00000583483 TMEM60Q9H2L4 133 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
CDH8-210ENST00000583483 VAV3Q9UKW4 847 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 PCDHB10Q9UN67 800 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 SNX11Q9Y5W9 270 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 SMCHD1A6NHR9 2005 aa7.5□□□□□ -1.21
CDH8-210ENST00000583483 GOLGA6L6A8MZA4 724 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms