RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
CDH8-210ENST00000583483 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
CDH8-210ENST00000583483 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
CDH8-210ENST00000583483 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
CDH8-210ENST00000583483 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
CDH8-210ENST00000583483 FOXD1Q16676 465 aa19.99■□□□□ 0.79
CDH8-210ENST00000583483 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
CDH8-210ENST00000583483 ADRA2BP18089 450 aa19.32■□□□□ 0.68
CDH8-210ENST00000583483 PIAS4Q8N2W9 510 aaPredicted RBP18.75■□□□□ 0.59
CDH8-210ENST00000583483 MSH5O43196 834 aa18.21■□□□□ 0.51
CDH8-210ENST00000583483 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
CDH8-210ENST00000583483 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
CDH8-210ENST00000583483 KCNA4P22459 653 aa17.53■□□□□ 0.4
CDH8-210ENST00000583483 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
CDH8-210ENST00000583483 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
CDH8-210ENST00000583483 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
CDH8-210ENST00000583483 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
CDH8-210ENST00000583483 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
CDH8-210ENST00000583483 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
CDH8-210ENST00000583483 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
CDH8-210ENST00000583483 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
CDH8-210ENST00000583483 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
CDH8-210ENST00000583483 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
CDH8-210ENST00000583483 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
CDH8-210ENST00000583483 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
CDH8-210ENST00000583483 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
CDH8-210ENST00000583483 ZBTB22O15209 634 aa16.21■□□□□ 0.19
CDH8-210ENST00000583483 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
CDH8-210ENST00000583483 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
CDH8-210ENST00000583483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDH8-210ENST00000583483 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
CDH8-210ENST00000583483 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
CDH8-210ENST00000583483 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
CDH8-210ENST00000583483 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
CDH8-210ENST00000583483 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
CDH8-210ENST00000583483 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
CDH8-210ENST00000583483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
CDH8-210ENST00000583483 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
CDH8-210ENST00000583483 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
CDH8-210ENST00000583483 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
CDH8-210ENST00000583483 CAPN15O75808 1086 aa15.21■□□□□ 0.03
CDH8-210ENST00000583483 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
CDH8-210ENST00000583483 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
CDH8-210ENST00000583483 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
CDH8-210ENST00000583483 APLP2Q06481 763 aa15.18■□□□□ 0.02
CDH8-210ENST00000583483 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
CDH8-210ENST00000583483 DSG3P32926 999 aa15.01□□□□□ -0.01
CDH8-210ENST00000583483 ABCB7O75027 752 aa15□□□□□ -0.01
CDH8-210ENST00000583483 POLA2Q14181 598 aa14.99□□□□□ -0.01
CDH8-210ENST00000583483 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
CDH8-210ENST00000583483 FBLN2P98095 1184 aa14.58□□□□□ -0.08
CDH8-210ENST00000583483 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
CDH8-210ENST00000583483 FKBP8Q14318 412 aa14.48□□□□□ -0.09
CDH8-210ENST00000583483 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
CDH8-210ENST00000583483 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
CDH8-210ENST00000583483 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
CDH8-210ENST00000583483 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
CDH8-210ENST00000583483 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
CDH8-210ENST00000583483 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
CDH8-210ENST00000583483 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
CDH8-210ENST00000583483 PROM2Q8N271 834 aa14.2□□□□□ -0.14
CDH8-210ENST00000583483 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
CDH8-210ENST00000583483 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDH8-210ENST00000583483 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
CDH8-210ENST00000583483 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
CDH8-210ENST00000583483 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
CDH8-210ENST00000583483 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
CDH8-210ENST00000583483 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
CDH8-210ENST00000583483 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
CDH8-210ENST00000583483 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
CDH8-210ENST00000583483 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
CDH8-210ENST00000583483 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
CDH8-210ENST00000583483 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
CDH8-210ENST00000583483 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
CDH8-210ENST00000583483 MIER1Q8N108 512 aa13.62□□□□□ -0.23
CDH8-210ENST00000583483 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
CDH8-210ENST00000583483 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
CDH8-210ENST00000583483 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDH8-210ENST00000583483 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
CDH8-210ENST00000583483 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
CDH8-210ENST00000583483 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
CDH8-210ENST00000583483 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
CDH8-210ENST00000583483 KLHL34Q8N239 644 aa13.45□□□□□ -0.26
CDH8-210ENST00000583483 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
CDH8-210ENST00000583483 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
CDH8-210ENST00000583483 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
CDH8-210ENST00000583483 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
CDH8-210ENST00000583483 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
CDH8-210ENST00000583483 NUBP1P53384 320 aa13.34□□□□□ -0.27
CDH8-210ENST00000583483 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
CDH8-210ENST00000583483 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
CDH8-210ENST00000583483 PKD2Q13563 968 aa13.23□□□□□ -0.29
CDH8-210ENST00000583483 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDH8-210ENST00000583483 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
CDH8-210ENST00000583483 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
CDH8-210ENST00000583483 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
CDH8-210ENST00000583483 POTEHQ6S545 545 aa13.12□□□□□ -0.31
CDH8-210ENST00000583483 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
CDH8-210ENST00000583483 EVX2Q03828 476 aa13.1□□□□□ -0.31
CDH8-210ENST00000583483 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms