RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 CRLF3Q8IUI8 442 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 ATL2Q8NHH9 583 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 PRPF31Q8WWY3 499 aaKnown RBP12.45□□□□□ -0.42
SIN3A-208ENST00000567289 TATDN2Q93075 761 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 PWWP2AQ96N64 755 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 KDM4CQ9H3R0 1056 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 SIK3Q9Y2K2 1263 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 ATP6V1B1P15313 513 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 MARK3P27448 753 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 BPIFB4P59827 614 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 KRT80Q6KB66 452 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 RAPH1Q70E73 1250 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 SH3GL2Q99962 352 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 MKNK1Q9BUB5 465 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 ZCWPW1Q9H0M4 648 aa12.45□□□□□ -0.42
SIN3A-208ENST00000567289 F5H6K3 240 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CYTH3O43739 400 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 ZBED4O75132 1171 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 HNRNPCP07910 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 RALAP11233 206 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 ATP2B4P23634 1241 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 EPHB2P29323 1055 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 MAGEA4P43358 317 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 RPL21P46778 160 aaKnown RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 ARL4CP56559 192 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CDK17Q00537 523 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 KLRC3Q07444 240 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CYTH1Q15438 398 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 KRT35Q92764 455 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 FAF2Q96CS3 445 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 LXNQ9BS40 222 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 ABCB11O95342 1321 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 TJP3O95049 919 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 TMEM253P0C7T8 217 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 KRT10P13645 584 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 KRT4P19013 534 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CUL3Q13618 768 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 COG2Q14746 738 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 MTDHQ86UE4 582 aaKnown RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 SLC13A5Q86YT5 568 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 SLC25A41Q8N5S1 370 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 SPATA20Q8TB22 786 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 ZNF512BQ96KM6 892 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 TRIM56Q9BRZ2 755 aaKnown RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 WDR11Q9BZH6 1224 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 PSMA2P25787 234 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 YARSP54577 528 aaKnown RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 ACTRT1Q8TDG2 376 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 RNF34Q969K3 372 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-208ENST00000567289 CCDC17Q96LX7 622 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 Q9H521 79 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 MTMR4Q9NYA4 1195 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 HEY2Q9UBP5 337 aa12.44□□□□□ -0.42
SIN3A-208ENST00000567289 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 DENND3A2RUS2 1198 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 RAD17O75943 681 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 LMNAP02545 664 aaKnown RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 NFIXQ14938 502 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 TRMT10CQ7L0Y3 403 aaKnown RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 NUDCD3Q8IVD9 361 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 AGGF1Q8N302 714 aaeCLIP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 C7orf31Q8N865 590 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 ACAP3Q96P50 834 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 CHMP2BQ9UQN3 213 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 DDX3XO00571 662 aaKnown RBP eCLIP12.43□□□□□ -0.429e-7■□□□□ 10.3
SIN3A-208ENST00000567289 STAT2P52630 851 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 STAT4Q14765 748 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 SMTNL2Q2TAL5 461 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 CXorf38Q8TB03 319 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 SLC5A5Q92911 643 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 ARHGEF26Q96DR7 871 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 LRGUKQ96M69 825 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 PNMA5Q96PV4 448 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 TSSK1BQ9BXA7 367 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 IL17RBQ9NRM6 502 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 RICTORQ6R327 1708 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 EME2A4GXA9 379 aaPredicted RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 RTN2O75298 545 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 SUPT3HO75486 399 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 EDRF1Q3B7T1 1238 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 C3orf62Q6ZUJ4 267 aa12.43□□□□□ -0.42
SIN3A-208ENST00000567289 APTXQ7Z2E3 356 aaKnown RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 WDR75Q8IWA0 830 aaKnown RBP12.43□□□□□ -0.42
SIN3A-208ENST00000567289 FAM149B1Q96BN6 582 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms