RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 ID4P47928 161 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 HSP90AA2PQ14568 343 aaPredicted RBP11.84□□□□□ -0.51
SHF-203ENST00000558294 CALCRLQ16602 461 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 PRSS55Q6UWB4 352 aaPredicted RBP11.84□□□□□ -0.51
SHF-203ENST00000558294 ERMP1Q7Z2K6 904 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 PIGOQ8TEQ8 1089 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 PAAF1Q9BRP4 392 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 TTC12Q9H892 705 aaPredicted RBP11.84□□□□□ -0.51
SHF-203ENST00000558294 ARHGEF3Q9NR81 526 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 SLC2A4RGQ9NR83 387 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 DLGAP2Q9P1A6 1054 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
SHF-203ENST00000558294 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 NUMBLQ9Y6R0 609 aa11.84□□□□□ -0.51
SHF-203ENST00000558294 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.513e-6■■■■■ 137.9
SHF-203ENST00000558294 A0A087WWV3 80 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 WNT7AO00755 349 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 LMNAP02545 664 aaKnown RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 DCNP07585 359 aaKnown RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 RFX1P22670 979 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 FSHRP23945 695 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 TUSC3Q13454 348 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 CDCA2Q69YH5 1023 aaPredicted RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 ST13P5Q8NFI4 369 aaPredicted RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 WASF1Q92558 559 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 CLSTN3Q9BQT9 956 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 SEMA4AQ9H3S1 761 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 GPRC5CQ9NQ84 441 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 PRMT7Q9NVM4 692 aaPredicted RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 SIT1Q9Y3P8 196 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
SHF-203ENST00000558294 R4GN57 208 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 SPTBN4Q9H254 2564 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
SHF-203ENST00000558294 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
SHF-203ENST00000558294 CASTOR2A6NHX0 329 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 LRRIQ4A6NIV6 560 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 PTGESO14684 152 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
SHF-203ENST00000558294 KIF4AO95239 1232 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 XRCC6P12956 609 aaKnown RBP eCLIP11.82□□□□□ -0.52
SHF-203ENST00000558294 TXKP42681 527 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 ANAPC15P60006 121 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 NAB2Q15742 525 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 FAM187BQ17R55 369 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 SPECC1Q5M775 1068 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 DCLRE1AQ6PJP8 1040 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 PARM1Q6UWI2 310 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 GRASPQ7Z6J2 395 aaPredicted RBP11.82□□□□□ -0.52
SHF-203ENST00000558294 LNX1Q8TBB1 728 aaPredicted RBP11.82□□□□□ -0.52
SHF-203ENST00000558294 HASPINQ8TF76 798 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 PIK3R5Q8WYR1 880 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 FGF14Q92915 247 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 MTMR9Q96QG7 549 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 TTPALQ9BTX7 342 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 RPP25Q9BUL9 199 aaKnown RBP11.82□□□□□ -0.52
SHF-203ENST00000558294 CXCL16Q9H2A7 254 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 FZD8Q9H461 694 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 PDZD7Q9H5P4 517 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 SNTG2Q9NY99 539 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
SHF-203ENST00000558294 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
SHF-203ENST00000558294 COL4A3Q01955 1670 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 DMXL1Q9Y485 3027 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 POTEMA6NI47 508 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 BTBD18B2RXH4 712 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 ADAM12O43184 909 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 NEMFO60524 1076 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 C8AP07357 584 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 HNRNPA1P09651 372 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHF-203ENST00000558294 SP9P0CG40 484 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 SPATA31C1P0DKV0 1188 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 GLULP15104 373 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 HOXA9P31269 272 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 STARD6P59095 220 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 NTHL1P78549 312 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 PSMD5Q16401 504 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 LIN9Q5TKA1 542 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 FAM171A1Q5VUB5 890 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 MAEAQ7L5Y9 396 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 C1orf210Q8IVY1 113 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 PJA1Q8NG27 643 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 KCNG4Q8TDN1 519 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 FOXQ1Q9C009 403 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 CDH7Q9ULB5 785 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 FANCMQ8IYD8 2048 aa11.81□□□□□ -0.52
SHF-203ENST00000558294 ZNF292O60281 2723 aa11.8□□□□□ -0.52
SHF-203ENST00000558294 VWA8A3KMH1 1905 aa11.8□□□□□ -0.52
SHF-203ENST00000558294 N4BP3O15049 544 aa11.8□□□□□ -0.52
SHF-203ENST00000558294 LRRN2O75325 713 aa11.8□□□□□ -0.52
SHF-203ENST00000558294 RECQL4O94761 1208 aa11.8□□□□□ -0.52
SHF-203ENST00000558294 EDN1P05305 212 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms