RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 VAV1P15498 845 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 BDNFP23560 247 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 DDIT3P35638 169 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 KRT85P78386 507 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 PTH1RQ03431 593 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 KCNAB2Q13303 367 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 ANKRD1Q15327 319 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 KIZQ2M2Z5 673 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 SGO2Q562F6 1265 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 SLC9C2Q5TAH2 1124 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 ESRP1Q6NXG1 681 aaKnown RBP6.94□□□□□ -1.3
FOXN3-215ENST00000557261 LILRA6Q6PI73 481 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 GRAMD1CQ8IYS0 662 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 KIAA1958Q8N8K9 716 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 TBC1D22AQ8WUA7 517 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 TTC17Q96AE7 1141 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 TRIM11Q96F44 468 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 ZDHHC5Q9C0B5 715 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 TMX4Q9H1E5 349 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-215ENST00000557261 SEMA4AQ9H3S1 761 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 NGRNQ9NPE2 291 aaKnown RBP6.94□□□□□ -1.3
FOXN3-215ENST00000557261 NLRC4Q9NPP4 1024 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 PIH1D3Q9NQM4 214 aaKnown RBP6.94□□□□□ -1.3
FOXN3-215ENST00000557261 GPATCH2Q9NW75 528 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 MAP3K20Q9NYL2 800 aaKnown RBP6.94□□□□□ -1.3
FOXN3-215ENST00000557261 LZTS1Q9Y250 596 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 PCDHGB3Q9Y5G1 929 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 MORC2Q9Y6X9 1032 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-215ENST00000557261 FAM205AQ6ZU69 1335 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 ZNF532Q9HCE3 1301 aa6.94□□□□□ -1.3
FOXN3-215ENST00000557261 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 ABHD14A-ACY1A0A1B0GW23 586 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 IDH1O75874 414 aaKnown RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 UFL1O94874 794 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 CLEC2LP0C7M8 214 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 PCP11498 1178 aaKnown RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 CHRNA4P43681 627 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 GYG1P46976 350 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 GJA9P57773 515 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 FKBP1AP62942 108 aaKnown RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 GPSM2P81274 684 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 IRF9Q00978 393 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 CUL4AQ13619 759 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 GPR162Q16538 588 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 FAM47CQ5HY64 1035 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 TOR2AQ5JU69 321 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 E4F1Q66K89 784 aaPredicted RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 SEZ6L2Q6UXD5 910 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 RUFY3Q7L099 469 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 CD163Q86VB7 1156 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 PTRH1Q86Y79 214 aaKnown RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 FAM186BQ8IYM0 893 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 DTWD1Q8N5C7 304 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 TBC1D16Q8TBP0 767 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 TCTN2Q96GX1 697 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 EYA3Q99504 573 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 AGXT2Q9BYV1 514 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 COA1Q9GZY4 146 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 RNF38Q9H0F5 515 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 VPS33BQ9H267 617 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 TUBD1Q9UJT1 453 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 EDARQ9UNE0 448 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 SPO11Q9Y5K1 396 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 CYP46A1Q9Y6A2 500 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 BAZ2AQ9UIF9 1905 aaKnown RBP6.93□□□□□ -1.3
FOXN3-215ENST00000557261 SCN9AQ15858 1988 aa6.93□□□□□ -1.3
FOXN3-215ENST00000557261 FAM47E-STBD1D6RA91 191 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 H7C1D1 291 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 SNAP23O00161 211 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 FOXP2O15409 715 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 KDM1AO60341 852 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 PQBP1O60828 265 aaKnown RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 CYP21A2P08686 494 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 FURINP09958 794 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 RPS6KB1P23443 525 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 KLRK1P26718 216 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 BCL6P41182 706 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 USP11P51784 963 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 TGFB2P61812 414 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 GSTO1P78417 241 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 LACTBP83111 547 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 SEC23AQ15436 765 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 IMMTQ16891 758 aaKnown RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 CPZQ66K79 652 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 RCSD1Q6JBY9 416 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 ZPBP2Q6X784 338 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 FAM214BQ7L5A3 538 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 C2CD5Q86YS7 1000 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 KSR1Q8IVT5 923 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 DIS3LQ8TF46 1054 aaKnown RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 DPF3Q92784 378 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 HPS3Q969F9 1004 aa6.92□□□□□ -1.3
FOXN3-215ENST00000557261 NSUN4Q96CB9 384 aaKnown RBP6.92□□□□□ -1.3
FOXN3-215ENST00000557261 CHAMP1Q96JM3 812 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms