RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 GPR152Q8TDT2 470 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 ASAP3Q8TDY4 903 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 B3GALT6Q96L58 329 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 GPR62Q9BZJ7 368 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 ARHGEF3Q9NR81 526 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 SIT1Q9Y3P8 196 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 R4GN57 208 aa17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 SF3B1O75533 1304 aaKnown RBP eCLIP17.14■□□□□ 0.33
SUPT16H-205ENST00000556217 ANHXE9PGG2 379 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 ZMYND10O75800 440 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 NPTXRO95502 500 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 ARL2P36404 184 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 HTR4Q13639 388 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 LILRA6Q6PI73 481 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 RUBCNQ92622 972 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 HSD17B14Q9BPX1 270 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
SUPT16H-205ENST00000556217 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 GLRA2P23416 452 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 FSHRP23945 695 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 KRT2P35908 639 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 HSP90AA2PQ14568 343 aaPredicted RBP17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 CALCRLQ16602 461 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 LIN9Q5TKA1 542 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 DCLRE1AQ6PJP8 1040 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 GSTCDQ8NEC7 633 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 SHDQ96IW2 340 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 POLR3FQ9H1D9 316 aaPredicted RBP17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 SLC2A4RGQ9NR83 387 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 GJB4Q9NTQ9 266 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 KLK14Q9P0G3 267 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 NUMBLQ9Y6R0 609 aa17.12■□□□□ 0.33
SUPT16H-205ENST00000556217 MIA3Q5JRA6 1907 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 B4GALT5O43286 388 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 PFKFB2O60825 505 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 HNRNPA1P09651 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 RARRES1P49788 294 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 TUSC3Q13454 348 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 DOCK6Q96HP0 2047 aa17.11■□□□□ 0.33
SUPT16H-205ENST00000556217 LRRIQ4A6NIV6 560 aa17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 DCNP07585 359 aaKnown RBP17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 XRCC6P12956 609 aaKnown RBP eCLIP17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 RSPO4Q2I0M5 234 aaPredicted RBP17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 PRSS55Q6UWB4 352 aaPredicted RBP17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 C1orf210Q8IVY1 113 aa17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 FBXW11Q9UKB1 542 aa17.1■□□□□ 0.33
SUPT16H-205ENST00000556217 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 USO1O60763 962 aaKnown RBP17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 XYLBO75191 536 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 SDHBP21912 280 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 NR5A1Q13285 461 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 PSMD5Q16401 504 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 TMEM132AQ24JP5 1023 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 RTP2Q5QGT7 225 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 PPM1LQ5SGD2 360 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 FAM171A1Q5VUB5 890 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 MTSS1LQ765P7 747 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 GRASPQ7Z6J2 395 aaPredicted RBP17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 MCPH1Q8NEM0 835 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 PJA1Q8NG27 643 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 PIGOQ8TEQ8 1089 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 PIK3R5Q8WYR1 880 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 CDH7Q9ULB5 785 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 TPCN1Q9ULQ1 816 aa17.09■□□□□ 0.33
SUPT16H-205ENST00000556217 GPR179Q6PRD1 2367 aa17.08■□□□□ 0.33
SUPT16H-205ENST00000556217 N4BP3O15049 544 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 NEMFO60524 1076 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 THP07101 528 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 SP9P0CG40 484 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 HOXA9P31269 272 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 TXKP42681 527 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 STARD6P59095 220 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 DCLK2Q8N568 766 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 HASPINQ8TF76 798 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 CLSTN3Q9BQT9 956 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.32
SUPT16H-205ENST00000556217 MAP1BP46821 2468 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms