RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 Q4G0T1 1027 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 GLRA4Q5JXX5 417 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 SYCP2LQ5T4T6 812 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 C4orf50Q6ZRC1 276 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 TEX2Q8IWB9 1127 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 ARHGEF2Q92974 986 aaKnown RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 ADAM33Q9BZ11 813 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 MLXIPLQ9NP71 852 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 FAM49BQ9NUQ9 324 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 CETPP11597 493 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 RFX1P22670 979 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 ORC1Q13415 861 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 LY6KQ17RY6 165 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 RASSF4Q9H2L5 321 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 AGO4Q9HCK5 861 aaKnown RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 GINM1Q9NU53 330 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 RTN2O75298 545 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 CYP2C8P10632 490 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 NR1D1P20393 614 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 KCNJ1P48048 391 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 PYROXD1Q8WU10 500 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 FHDC1Q9C0D6 1143 aaPredicted RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 TMEM117Q9H0C3 514 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 A1CFQ9NQ94 594 aaKnown RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 RBM12Q9NTZ6 932 aaKnown RBP12.42□□□□□ -0.42
LGR5-206ENST00000550851 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 STK38LQ9Y2H1 464 aa12.42□□□□□ -0.42
LGR5-206ENST00000550851 TISP43B9A030 160 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CREB3O43889 395 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CRCPO75575 148 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CPP00450 1065 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 IRX4P78413 519 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 IFT88Q13099 833 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CUL1Q13616 776 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 RIN2Q8WYP3 895 aaPredicted RBP12.41□□□□□ -0.42
LGR5-206ENST00000550851 MKL1Q969V6 931 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 TMEM8AQ9HCN3 771 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 HBP1O60381 514 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 TFRCP02786 760 aaKnown RBP12.41□□□□□ -0.42
LGR5-206ENST00000550851 KRT3P12035 628 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 PTPRAP18433 802 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 DSG3P32926 999 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 MDM2Q00987 491 aaPredicted RBP12.41□□□□□ -0.42
LGR5-206ENST00000550851 MAP7D1Q3KQU3 841 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 MFSD14CQ5VZR4 134 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 DDX42Q86XP3 938 aaKnown RBP eCLIP12.41□□□□□ -0.42
LGR5-206ENST00000550851 RHOT1Q8IXI2 618 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 KLHL14Q9P2G3 628 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CPA4Q9UI42 421 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 ALG6Q9Y672 507 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 PODXLO00592 558 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 TTI1O43156 1089 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 SUPT20HL2P0C7V6 817 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 CASP5P51878 434 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 SLMAPQ14BN4 828 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 IER5Q5VY09 327 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 DCLK2Q8N568 766 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 SMC1BQ8NDV3 1235 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 GDAP1Q8TB36 358 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 TRAPPC12Q8WVT3 735 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 RBM41Q96IZ5 413 aaKnown RBP12.41□□□□□ -0.42
LGR5-206ENST00000550851 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 STRIP2Q9ULQ0 834 aa12.41□□□□□ -0.42
LGR5-206ENST00000550851 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
LGR5-206ENST00000550851 GIPC1O14908 333 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 LCP1P13796 627 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 NME3Q13232 169 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 KIZQ2M2Z5 673 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 NT5DC1Q5TFE4 455 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 MCUR1Q96AQ8 359 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 C18orf8Q96DM3 657 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
LGR5-206ENST00000550851 SIK2Q9H0K1 926 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.42
LGR5-206ENST00000550851 BNIP3LO60238 219 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 COMTP21964 271 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 CA4P22748 312 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 MSH2P43246 934 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 CDH6P55285 790 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
LGR5-206ENST00000550851 GABPB2Q8TAK5 448 aaPredicted RBP12.4□□□□□ -0.42
LGR5-206ENST00000550851 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 KLK14Q9P0G3 267 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 BAIAP2L1Q9UHR4 511 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
LGR5-206ENST00000550851 VTNP04004 478 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms