RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 FGF11Q92914 225 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 EAF2Q96CJ1 260 aaPredicted RBP3.75□□□□□ -1.81
CHD4-209ENST00000542717 TMEM176AQ96HP8 235 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 SPACA7Q96KW9 195 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 B3GALT6Q96L58 329 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 UBA5Q9GZZ9 404 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 MAF1Q9H063 256 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 RXFP1Q9HBX9 757 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 TMEM74BQ9NUR3 256 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 DACT1Q9NYF0 836 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 PKD2L1Q9P0L9 805 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 DNMT3BQ9UBC3 853 aaKnown RBP3.75□□□□□ -1.81
CHD4-209ENST00000542717 ADAMTS9Q9P2N4 1935 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 FBN3Q75N90 2809 aa3.75□□□□□ -1.81
CHD4-209ENST00000542717 EML5Q05BV3 1969 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 WDR81Q562E7 1941 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 MTCL1Q9Y4B5 1905 aaKnown RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 KNTC1P50748 2209 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 PNMA6EA0A0J9YXQ4 647 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 MYBPHLA2RUH7 354 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 SPATA31C2B4DYI2 1134 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ARHGAP33O14559 1287 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 TNFRSF10BO14763 440 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 RANBP6O60518 1105 aaKnown RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 DIAPH2O60879 1101 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 RNF40O75150 1001 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 NR1I2O75469 434 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 PAPLNO95428 1278 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 C1RP00736 705 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 VTNP04004 478 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 RHOP08100 348 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ATXN1LP0C7T5 689 aaKnown RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 GOLGA8HP0CJ92 632 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 JUPP14923 745 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ITPKAP23677 461 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 FCARP24071 287 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ACTN2P35609 894 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 HNF1BP35680 557 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 PTGER3P43115 390 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 AFMP43652 599 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 DSG1Q02413 1049 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 PTH1RQ03431 593 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 MTX1Q13505 466 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 DMC1Q14565 340 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 WDR44Q5JSH3 913 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 KIAA1614Q5VZ46 1190 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 TWF2Q6IBS0 349 aaKnown RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 ANO7Q6IWH7 933 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 LILRA6Q6PI73 481 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 DHRS13Q6UX07 377 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 RABEPKQ7Z6M1 372 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ZNF598Q86UK7 904 aaKnown RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 MFSD6LQ8IWD5 586 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 WDR63Q8IWG1 891 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 GIMAP8Q8ND71 665 aaPredicted RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 SNIP1Q8TAD8 396 aaKnown RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 TTC9Q92623 222 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 MOCOSQ96EN8 888 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ZNF668Q96K58 619 aaPredicted RBP3.74□□□□□ -1.81
CHD4-209ENST00000542717 ASB16Q96NS5 453 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 TMEM209Q96SK2 561 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 ARHGAP9Q9BRR9 750 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 TMEM175Q9BSA9 504 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 CPVLQ9H3G5 476 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 SLITRK6Q9H5Y7 841 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 VAT1LQ9HCJ6 419 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 TOMM22Q9NS69 142 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 GTSE1Q9NYZ3 720 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 KANSL3Q9P2N6 904 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 EBF1Q9UH73 591 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 FBXW11Q9UKB1 542 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 PLIN4Q96Q06 1357 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 NAV3Q8IVL0 2385 aa3.74□□□□□ -1.81
CHD4-209ENST00000542717 DOCK5Q9H7D0 1870 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 ICE1Q9Y2F5 2266 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 RELNP78509 3460 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 SPTBN1Q01082 2364 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 GSTTP1A0A1W2PQM5 241 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 WDR27A2RRH5 827 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 GSG1L2A8MUP6 293 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 HEPACAM2A8MVW5 462 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 DPYSL4O14531 572 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 ZNF197O14709 1029 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 CHADO15335 359 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 SUV39H1O43463 412 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 OFD1O75665 1012 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 STAM2O75886 525 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 DDHD2O94830 711 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 POMCP01189 267 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 LRG1P02750 347 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 GNAI2P04899 355 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 SERPINF2P08697 491 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PDHBP11177 359 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 TOP1P11387 765 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 PTPN2P17706 415 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 FGFR4P22455 802 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 GRNP28799 593 aaKnown RBP3.73□□□□□ -1.81
CHD4-209ENST00000542717 HOXA9P31269 272 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 PHKA2P46019 1235 aa3.73□□□□□ -1.81
CHD4-209ENST00000542717 NLRP11P59045 1033 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms