RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TSG101Q99816 390 aa9.21□□□□□ -0.94
CHD4-208ENST00000540960 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
CHD4-208ENST00000540960 TRIM9Q9C026 710 aa9.21□□□□□ -0.94
CHD4-208ENST00000540960 TBC1D22BQ9NU19 505 aa9.21□□□□□ -0.94
CHD4-208ENST00000540960 ADD3Q9UEY8 706 aaKnown RBP9.21□□□□□ -0.94
CHD4-208ENST00000540960 KCNG1Q9UIX4 513 aa9.21□□□□□ -0.94
CHD4-208ENST00000540960 NFE2L3Q9Y4A8 694 aa9.21□□□□□ -0.94
CHD4-208ENST00000540960 GIPC1O14908 333 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
CHD4-208ENST00000540960 EDNRBP24530 442 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 UBE3AQ05086 875 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 TRIM14Q14142 442 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 HSP90AA2PQ14568 343 aaPredicted RBP9.2□□□□□ -0.94
CHD4-208ENST00000540960 NCAPHQ15003 741 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 CSRP2Q16527 193 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 ATAT1Q5SQI0 421 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 PCNX4Q63HM2 1172 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 SEPT14Q6ZU15 432 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 RASGRP2Q7LDG7 609 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 NLRX1Q86UT6 975 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 SLC44A3Q8N4M1 653 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 ST13P5Q8NFI4 369 aaPredicted RBP9.2□□□□□ -0.94
CHD4-208ENST00000540960 RDM1Q8NG50 284 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 TCF25Q9BQ70 676 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 TEKT3Q9BXF9 490 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 THAP9Q9H5L6 903 aa9.2□□□□□ -0.94
CHD4-208ENST00000540960 LOXHD1Q8IVV2 1947 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 SDK1Q7Z5N4 2213 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 ASXL3Q9C0F0 2248 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 A0A087X0B3 334 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 KIF2AO00139 706 aaPredicted RBP9.19□□□□□ -0.94
CHD4-208ENST00000540960 MEIS1O00470 390 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 WNT7AO00755 349 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 SLC37A4O43826 429 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 SORBS3O60504 671 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 GAS7O60861 476 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 GNA14O95837 355 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 ZNF18P17022 549 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 GAP43P17677 238 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 SCP2P22307 547 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 SFPQP23246 707 aaKnown RBP eCLIP9.19□□□□□ -0.94
CHD4-208ENST00000540960 SFNP31947 248 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 ABCD1P33897 745 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 LRRC63Q05C16 580 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 PPP2R5CQ13362 524 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 CUL4BQ13620 913 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 LPIN1Q14693 890 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 LRCH2Q5VUJ6 765 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 TMC5Q6UXY8 1006 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.19□□□□□ -0.94
CHD4-208ENST00000540960 RNF207Q6ZRF8 634 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 FCHSD1Q86WN1 690 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 GUF1Q8N442 669 aaKnown RBP9.19□□□□□ -0.94
CHD4-208ENST00000540960 ETNPPLQ8TBG4 499 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 NSUN6Q8TEA1 469 aaKnown RBP9.19□□□□□ -0.94
CHD4-208ENST00000540960 HAS1Q92839 578 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 SLC5A5Q92911 643 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 ACSF2Q96CM8 615 aaPredicted RBP9.19□□□□□ -0.94
CHD4-208ENST00000540960 CCDC51Q96ER9 411 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 MXRA8Q9BRK3 442 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 TIPINQ9BVW5 301 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 KATNAL1Q9BW62 490 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 RNPEPQ9H4A4 650 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 ARHGEF3Q9NR81 526 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 FANCLQ9NW38 375 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 IFNKQ9P0W0 207 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.942e-9■■■■□ 23.2
CHD4-208ENST00000540960 DOCK8Q8NF50 2099 aa9.19□□□□□ -0.94
CHD4-208ENST00000540960 LOC102724159A0A0B4J2E5 919 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 LRRC10BA6NIK2 292 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 CLASP2O75122 1294 aaKnown RBP9.18□□□□□ -0.94
CHD4-208ENST00000540960 RETP07949 1114 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 CCNE1P24864 410 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 CCND2P30279 289 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 HOXC8P31273 242 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 JAK3P52333 1124 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 PWP2Q15269 919 aaKnown RBP9.18□□□□□ -0.94
CHD4-208ENST00000540960 EPHA7Q15375 998 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
CHD4-208ENST00000540960 COL28A1Q2UY09 1125 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 GNPTABQ3T906 1256 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 KMT5BQ4FZB7 885 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 FAM26DQ5JW98 314 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 SPECC1LQ69YQ0 1117 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 LAIR1Q6GTX8 287 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 ISM2Q6H9L7 571 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 PDE12Q6L8Q7 609 aaKnown RBP9.18□□□□□ -0.94
CHD4-208ENST00000540960 DCLRE1AQ6PJP8 1040 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 CCDC186Q7Z3E2 898 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 PPFIBP1Q86W92 1011 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 THNSL1Q8IYQ7 743 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 NELFBQ8WX92 580 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 IWS1Q96ST2 819 aa9.18□□□□□ -0.94
CHD4-208ENST00000540960 ZNF577Q9BSK1 485 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms