RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TXLNAP40222 546 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 TOB1P50616 345 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 DSG1Q02413 1049 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 RTL10Q7L3V2 364 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 OTOP3Q7RTS5 596 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 UBALD2Q8IYN6 164 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 CMASQ8NFW8 434 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 EDAQ92838 391 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 INTS4Q96HW7 963 aaKnown RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 TSPAN18Q96SJ8 248 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 NTPCRQ9BSD7 190 aaKnown RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 TCHPQ9BT92 498 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 S1PR5Q9H228 398 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 PDZD7Q9H5P4 517 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 GPRC5CQ9NQ84 441 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 FNIP2Q9P278 1114 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 ODF2LQ9ULJ1 636 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 TNFSF13BQ9Y275 285 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 PRG3Q9Y2Y8 225 aaPredicted RBP11.42□□□□□ -0.58
CDCA3-208ENST00000540683 VWA3AA6NCI4 1184 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 MEIS3P2A8K0S8 358 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 B4GALT5O43286 388 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 LIG1P18858 919 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 ZRSR1Q15695 479 aaKnown RBP11.41□□□□□ -0.58
CDCA3-208ENST00000540683 RINT1Q6NUQ1 792 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 SYCE2Q6PIF2 218 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 CCDC149Q6ZUS6 474 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 BMP8AQ7Z5Y6 402 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 SUGP1Q8IWZ8 645 aaKnown RBP11.41□□□□□ -0.58
CDCA3-208ENST00000540683 SYT2Q8N9I0 419 aaPredicted RBP11.41□□□□□ -0.58
CDCA3-208ENST00000540683 TDRD5Q8NAT2 981 aaKnown RBP11.41□□□□□ -0.58
CDCA3-208ENST00000540683 VN1R2Q8NFZ6 395 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 FAM122AQ96E09 287 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 IRF2BPLQ9H1B7 796 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 HES2Q9Y543 173 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 PCDHGC5Q9Y5F6 944 aa11.41□□□□□ -0.58
CDCA3-208ENST00000540683 XPOTO43592 962 aaKnown RBP11.4□□□□□ -0.58
CDCA3-208ENST00000540683 HIP1RO75146 1068 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 TOM1L1O75674 476 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDCA3-208ENST00000540683 KRT18P05783 430 aaKnown RBP11.4□□□□□ -0.58
CDCA3-208ENST00000540683 CNPP09543 421 aaKnown RBP11.4□□□□□ -0.58
CDCA3-208ENST00000540683 MCF2P10911 925 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 PLS3P13797 630 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 PAX3P23760 479 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 AKAP5P24588 427 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 NPTX2P47972 431 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 CLCN4P51793 760 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 PEX3P56589 373 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 MTMR3Q13615 1198 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 FUT10Q6P4F1 479 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZPBP2Q6X784 338 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 C1orf186Q6ZWK4 172 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZDHHC14Q8IZN3 488 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 SLC22A17Q8WUG5 538 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZFP42Q96MM3 310 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 KLHL5Q96PQ7 755 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZSCAN16Q9H4T2 348 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-208ENST00000540683 RXFP1Q9HBX9 757 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 CD320Q9NPF0 282 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 CHST7Q9NS84 486 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZDHHC7Q9NXF8 308 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-208ENST00000540683 ARHGEF37A1IGU5 675 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 E9PMD0 336 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 TBCAO75347 108 aaKnown RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 RECQL4O94761 1208 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 RPL9P32969 192 aaKnown RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 GRM5P41594 1212 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 SIGLEC14Q08ET2 396 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 CUL4AQ13619 759 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 PTPN21Q16825 1174 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 RARS2Q5T160 578 aaKnown RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 LIN9Q5TKA1 542 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 KIAA0319Q5VV43 1072 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 DCLRE1AQ6PJP8 1040 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 GPR149Q86SP6 731 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 RNF168Q8IYW5 571 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-208ENST00000540683 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 TTPALQ9BTX7 342 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 PLEKHA5Q9HAU0 1116 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 SNTG2Q9NY99 539 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 ARHGAP28Q9P2N2 729 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 MUTYHQ9UIF7 546 aa11.39□□□□□ -0.59
CDCA3-208ENST00000540683 SORCS3Q9UPU3 1222 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms