RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 KRT2P35908 639 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 CALCRLQ16602 461 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 PRSS55Q6UWB4 352 aaPredicted RBP23.64■■□□□ 1.37
SSH3-211ENST00000534112 KCNG4Q8TDN1 519 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 PIGOQ8TEQ8 1089 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 WASF1Q92558 559 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 CCDC43Q96MW1 224 aaKnown RBP23.64■■□□□ 1.37
SSH3-211ENST00000534112 PAAF1Q9BRP4 392 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 POLR3FQ9H1D9 316 aaPredicted RBP23.64■■□□□ 1.37
SSH3-211ENST00000534112 TTC12Q9H892 705 aaPredicted RBP23.64■■□□□ 1.37
SSH3-211ENST00000534112 ARHGEF3Q9NR81 526 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 ZMYM2Q9UBW7 1377 aa23.64■■□□□ 1.37
SSH3-211ENST00000534112 LMNAP02545 664 aaKnown RBP23.63■■□□□ 1.37
SSH3-211ENST00000534112 DCNP07585 359 aaKnown RBP23.63■■□□□ 1.37
SSH3-211ENST00000534112 HSP90AA2PQ14568 343 aaPredicted RBP23.63■■□□□ 1.37
SSH3-211ENST00000534112 RTP2Q5QGT7 225 aa23.63■■□□□ 1.37
SSH3-211ENST00000534112 ST13P5Q8NFI4 369 aaPredicted RBP23.63■■□□□ 1.37
SSH3-211ENST00000534112 SLC2A4RGQ9NR83 387 aa23.63■■□□□ 1.37
SSH3-211ENST00000534112 SIT1Q9Y3P8 196 aa23.63■■□□□ 1.37
SSH3-211ENST00000534112 NUMBLQ9Y6R0 609 aa23.63■■□□□ 1.37
SSH3-211ENST00000534112 SF3B1O75533 1304 aaKnown RBP eCLIP23.62■■□□□ 1.37
SSH3-211ENST00000534112 XRCC6P12956 609 aaKnown RBP eCLIP23.62■■□□□ 1.37
SSH3-211ENST00000534112 FDPSP14324 419 aaKnown RBP23.62■■□□□ 1.37
SSH3-211ENST00000534112 FSHRP23945 695 aa23.62■■□□□ 1.37
SSH3-211ENST00000534112 SPECC1Q5M775 1068 aa23.62■■□□□ 1.37
SSH3-211ENST00000534112 BRMS1Q9HCU9 246 aa23.62■■□□□ 1.37
SSH3-211ENST00000534112 DLGAP2Q9P1A6 1054 aa23.62■■□□□ 1.37
SSH3-211ENST00000534112 ZFP37Q9Y6Q3 630 aaPredicted RBP23.62■■□□□ 1.37
SSH3-211ENST00000534112 R4GN57 208 aa23.62■■□□□ 1.37
SSH3-211ENST00000534112 DOCK8Q8NF50 2099 aa23.62■■□□□ 1.37
SSH3-211ENST00000534112 LRRIQ4A6NIV6 560 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 USO1O60763 962 aaKnown RBP23.61■■□□□ 1.37
SSH3-211ENST00000534112 TXKP42681 527 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 TUSC3Q13454 348 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 DCLRE1AQ6PJP8 1040 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 PPP4R3CPQ6ZMV5 832 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 MAEAQ7L5Y9 396 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 GRASPQ7Z6J2 395 aaPredicted RBP23.61■■□□□ 1.37
SSH3-211ENST00000534112 HASPINQ8TF76 798 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 CLSTN3Q9BQT9 956 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 TTPALQ9BTX7 342 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 RPP25Q9BUL9 199 aaKnown RBP23.61■■□□□ 1.37
SSH3-211ENST00000534112 GPRC5CQ9NQ84 441 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 FBXW11Q9UKB1 542 aa23.61■■□□□ 1.37
SSH3-211ENST00000534112 FAM171A1Q5VUB5 890 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 CEP57Q86XR8 500 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 LNX1Q8TBB1 728 aaPredicted RBP23.6■■□□□ 1.37
SSH3-211ENST00000534112 PIK3R5Q8WYR1 880 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 PRIMPOLQ96LW4 560 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 MTMR9Q96QG7 549 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 FZD8Q9H461 694 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 PRMT7Q9NVM4 692 aaPredicted RBP23.6■■□□□ 1.37
SSH3-211ENST00000534112 CDH7Q9ULB5 785 aa23.6■■□□□ 1.37
SSH3-211ENST00000534112 CASTOR2A6NHX0 329 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 WNT7AO00755 349 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 NEMFO60524 1076 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 KIF4AO95239 1232 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 HNRNPA1P09651 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
SSH3-211ENST00000534112 GPC5P78333 572 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 PARM1Q6UWI2 310 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 C1orf210Q8IVY1 113 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 FGF14Q92915 247 aa23.59■■□□□ 1.37
SSH3-211ENST00000534112 CACNA1AO00555 2505 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 TTLL13PA6NNM8 815 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 BTBD18B2RXH4 712 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 PTGESO14684 152 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 SPATA31C1P0DKV0 1188 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 STARD6P59095 220 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 NTHL1P78549 312 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 PSMD5Q16401 504 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 FAM187BQ17R55 369 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 LIN9Q5TKA1 542 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 CDCA2Q69YH5 1023 aaPredicted RBP23.58■■□□□ 1.37
SSH3-211ENST00000534112 FOXQ1Q9C009 403 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 SNTG2Q9NY99 539 aa23.58■■□□□ 1.37
SSH3-211ENST00000534112 POTEMA6NI47 508 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 ADAM12O43184 909 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 THP07101 528 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 C8AP07357 584 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 SP9P0CG40 484 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 GLULP15104 373 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 PPM1LQ5SGD2 360 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 ZBTB8OSQ8IWT0 167 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 NECAB1Q8N987 351 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 MCPH1Q8NEM0 835 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 PJA1Q8NG27 643 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 SHDQ96IW2 340 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 CXCL16Q9H2A7 254 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 PDZD7Q9H5P4 517 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 FRYLO94915 3013 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 TDRD15B5MCY1 1934 aaKnown RBP23.57■■□□□ 1.36
SSH3-211ENST00000534112 DMXL1Q9Y485 3027 aa23.57■■□□□ 1.36
SSH3-211ENST00000534112 ARID2Q68CP9 1835 aa23.56■■□□□ 1.36
SSH3-211ENST00000534112 N4BP3O15049 544 aa23.56■■□□□ 1.36
SSH3-211ENST00000534112 RECQL4O94761 1208 aa23.56■■□□□ 1.36
SSH3-211ENST00000534112 ATP2B1P20020 1258 aa23.56■■□□□ 1.36
SSH3-211ENST00000534112 HOXA9P31269 272 aa23.56■■□□□ 1.36
SSH3-211ENST00000534112 ELAVL2Q12926 359 aaKnown RBP23.56■■□□□ 1.36
SSH3-211ENST00000534112 ANKRD1Q15327 319 aa23.56■■□□□ 1.36
SSH3-211ENST00000534112 NAB2Q15742 525 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms