RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 FAM87AP0C7U9 286 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TGFB3P10600 412 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SYT1P21579 422 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CYP3A7P24462 503 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CTGFP29279 349 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 POLR2BP30876 1174 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ICAM3P32942 547 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KRT2P35908 639 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PRPHP41219 470 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 FLT3LGP49771 235 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NLRP5P59047 1200 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PRKCZQ05513 592 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RBL2Q08999 1139 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RESTQ13127 1097 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 BAATQ14032 418 aaPredicted RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SLBPQ14493 270 aaKnown RBP eCLIP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PLS1Q14651 629 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PGM5Q15124 567 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NONOQ15233 471 aaKnown RBP eCLIP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PLA2G4EQ3MJ16 856 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CCDC144BQ3MJ40 725 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CYP27C1Q4G0S4 372 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 Q4G0T1 1027 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RILPL1Q5EBL4 403 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ARHGEF16Q5VV41 709 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CDCP2Q5VXM1 449 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ATL3Q6DD88 541 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 OVOS1Q6IE37 1185 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PPP4R3AQ6IN85 833 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 LETMD1Q6P1Q0 360 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KCNV1Q6PIU1 500 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 FBXO46Q6PJ61 603 aaPredicted RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 USP17L6PQ6QN14 398 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 VHLLQ6RSH7 139 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NSMFQ6X4W1 530 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 UNC5AQ6ZN44 842 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ARMCX2Q7L311 632 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 OTOP1Q7RTM1 612 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 UBE3DQ7Z6J8 389 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CTU1Q7Z7A3 348 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NEK8Q86SG6 692 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 VSIG10LQ86VR7 867 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 LSRQ86X29 649 aaPredicted RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NOSTRINQ8IVI9 506 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CCAR1Q8IX12 1150 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MRPL41Q8IXM3 137 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SLFN12Q8IYM2 578 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TOP6BLQ8N6T0 577 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RBBP8NLQ8NC74 664 aaPredicted RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CD99L2Q8TCZ2 262 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TRIB2Q92519 343 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ARMC5Q96C12 935 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 DDX11Q96FC9 970 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MRFAP1L1Q96HT8 127 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MAML3Q96JK9 1138 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CDHR1Q96JP9 859 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 AIFM3Q96NN9 605 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 IPO9Q96P70 1041 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SRPK1Q96SB4 655 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RMDN3Q96TC7 470 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SENP7Q9BQF6 1050 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ARHGAP39Q9C0H5 1083 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KATNBL1Q9H079 304 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TNKS2Q9H2K2 1166 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 R3HDMLQ9H3Y0 253 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ABHD16BQ9H3Z7 469 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 GSX1Q9H4S2 264 aaPredicted RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 LRRC4CQ9HCJ2 640 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 VAT1LQ9HCJ6 419 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 VTA1Q9NP79 307 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 JADE2Q9NQC1 790 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PXMP2Q9NR77 195 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 HOMER2Q9NSB8 354 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 COL20A1Q9P218 1284 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NOL7Q9UMY1 257 aaKnown RBP2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PCDHB10Q9UN67 800 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PCDHA6Q9UN73 950 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CEP131Q9UPN4 1083 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MTMR6Q9Y217 621 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 Q9Y3F1 56 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PCDHA8Q9Y5H6 950 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 UBIAD1Q9Y5Z9 338 aa2.48□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CENPFP49454 3210 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PLXNB2O15031 1838 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 COL11A1P12107 1806 aaPredicted RBP2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NFASCO94856 1347 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 LCTP09848 1927 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 IGLV3-22A0A075B6J6 115 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 A0A1W2PQH9 124 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 VPS37CA5D8V6 355 aaPredicted RBP2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KIF28PB7ZC32 967 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 H3BQV1 296 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MEIS1O00470 390 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MSTNO14793 375 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RGS13O14921 159 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SEPT4O43236 478 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SLC26A4O43511 780 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 EDIL3O43854 480 aa2.47□□□□□ -2.01
SCARNA16.3-201ENST00000516595 DNAJA2O60884 412 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms