RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PP2D1A8MPX8 630 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 KPNA6O60684 536 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 PTENP60484 403 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 HSP90B2PQ58FF3 399 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 C10orf76Q5T2E6 689 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 OR52E8Q6IFG1 317 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 VSTM1Q6UX27 236 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 RNF207Q6ZRF8 634 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 UNC13DQ70J99 1090 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 DPP9Q86TI2 863 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 STAG2Q8N3U4 1231 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 NSUN6Q8TEA1 469 aaKnown RBP8□□□□□ -1.13
CLIP1-205ENST00000514271 FAM212AQ96EL1 285 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 TMEM237Q96Q45 408 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 NOD2Q9HC29 1040 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 HAUS2Q9NVX0 235 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 PCYOX1Q9UHG3 505 aa8□□□□□ -1.13
CLIP1-205ENST00000514271 EYA4O95677 639 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 SERPING1P05155 500 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 GRK4P32298 578 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 GFPT1Q06210 699 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 PAK2Q13177 524 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 PABPC1LQ4VXU2 614 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 MAP3K21Q5TCX8 1036 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ANKRD35Q8N283 1001 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 CPLX3Q8WVH0 158 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 SLX1AQ9BQ83 275 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 IFIH1Q9BYX4 1025 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 RAVER2Q9HCJ3 691 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 TXNRD2Q9NNW7 524 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 FBXO28Q9NVF7 368 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 DDX43Q9NXZ2 648 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 PCDHA1Q9Y5I3 950 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 MYMKA6NI61 221 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ADCY3O60266 1144 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 EDNRBP24530 442 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 GCAP28676 217 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ADSSP30520 456 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 PSMD2Q13200 908 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 TRIM29Q14134 588 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 DAB2IPQ5VWQ8 1189 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 GLIS3Q8NEA6 775 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 LMO3Q8TAP4 145 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 CLEC4DQ8WXI8 215 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 FIZ1Q96SL8 496 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ABHD16BQ9H3Z7 469 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ZNHIT6Q9NWK9 470 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 CYP39A1Q9NYL5 469 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 LGALS13Q9UHV8 139 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 NR2E1Q9Y466 385 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 KIAA1217Q5T5P2 1943 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 A0A087X0T9 212 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 HEXIM1O94992 359 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 FAM228BP0C875 321 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 T-ENOLP0DO92 83 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 TGFB3P10600 412 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ADORA2AP29274 412 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 USP8P40818 1118 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ADCY7P51828 1080 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 GUCY2DQ02846 1103 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 ZRSR2Q15696 482 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 SNCBQ16143 134 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 FAM91A1Q658Y4 838 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 XPO6Q96QU8 1125 aaKnown RBP7.99□□□□□ -1.13
CLIP1-205ENST00000514271 PACSIN1Q9BY11 444 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 TRAF3IP3Q9Y228 551 aa7.99□□□□□ -1.13
CLIP1-205ENST00000514271 CFAP73A6NFT4 308 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 E7ENQ6 273 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 PALMO75781 387 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CCND2P30279 289 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 PEX5P50542 639 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 DGKZQ13574 1117 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 LBRQ14739 615 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 PARP6Q2NL67 630 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 GNPTABQ3T906 1256 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ZC3H12AQ5D1E8 599 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 IQSEC1Q6DN90 963 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 TTBK2Q6IQ55 1244 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 KRT25Q7Z3Z0 450 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 DENND1AQ8TEH3 1009 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 GDAP1L1Q96MZ0 367 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 PIGSQ96S52 555 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CNOT10Q9H9A5 744 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 C17orf75Q9HAS0 396 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ADAM22Q9P0K1 906 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 GTPBP10A4D1E9 387 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 KIAA0391O15091 583 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 SNX3O60493 162 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 NPTXRO95502 500 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 PLCG1P19174 1290 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 FLT3LGP49771 235 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 RAB27AP51159 221 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 EPHA7Q15375 998 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ZNF174Q15697 407 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CNGA2Q16280 664 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ZNF571Q7Z3V5 609 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 KCNK18Q7Z418 384 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 NLRX1Q86UT6 975 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms