RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 CCDC12Q8WUD4 166 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-205ENST00000512925 TMEM143Q96AN5 459 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 JPH2Q9BR39 696 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-205ENST00000512925 COLEC11Q9BWP8 271 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 PRMT8Q9NR22 394 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-205ENST00000512925 PPP4R2Q9NY27 417 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 FBXW11Q9UKB1 542 aa11.61□□□□□ -0.55
PFDN1-205ENST00000512925 PATJQ8NI35 1801 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 CYP3A7-CYP3A51PA0A087WV96 503 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 EML1O00423 815 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 TDP2O95551 362 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 TDGF1P13385 188 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-205ENST00000512925 CYP3A7P24462 503 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 RPS9P46781 194 aaKnown RBP11.6□□□□□ -0.55
PFDN1-205ENST00000512925 PSMC5P62195 406 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 RTP2Q5QGT7 225 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 ZBTB41Q5SVQ8 909 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 PRSS55Q6UWB4 352 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-205ENST00000512925 MTSS1LQ765P7 747 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 RABGGTAQ92696 567 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 SECISBP2LQ93073 1101 aaKnown RBP11.6□□□□□ -0.55
PFDN1-205ENST00000512925 CLSTN3Q9BQT9 956 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 DHX33Q9H6R0 707 aaKnown RBP11.6□□□□□ -0.55
PFDN1-205ENST00000512925 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-205ENST00000512925 USP18Q9UMW8 372 aa11.6□□□□□ -0.55
PFDN1-205ENST00000512925 DOCK6Q96HP0 2047 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 MTCL1Q9Y4B5 1905 aaKnown RBP11.59□□□□□ -0.55
PFDN1-205ENST00000512925 TSPAN1O60635 241 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 HNRNPA1P09651 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
PFDN1-205ENST00000512925 PFKPQ01813 784 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 MTAPQ13126 283 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 NTRK3Q16288 839 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 TSGA10IPQ3SY00 556 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 ETNPPLQ8TBG4 499 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 BICD2Q8TD16 824 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 TBCKQ8TEA7 893 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 NELL2Q99435 816 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 KXD1Q9BQD3 176 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 PLA2G2FQ9BZM2 168 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 ANO2Q9NQ90 1003 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 ADAM28Q9UKQ2 775 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 GIT1Q9Y2X7 761 aa11.59□□□□□ -0.55
PFDN1-205ENST00000512925 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.59□□□□□ -0.55
PFDN1-205ENST00000512925 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.55
PFDN1-205ENST00000512925 CCDC196A0A1B0GTZ2 297 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 SLC30A4O14863 429 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 CCL16O15467 120 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 NR1I2O75469 434 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 HOXA9P31269 272 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 CREMQ03060 361 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 SPEM2Q0P670 501 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 AMHR2Q16671 573 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 PPM1JQ5JR12 505 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 TPRG1Q6ZUI0 275 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 NPAS3Q8IXF0 933 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 LNX1Q8TBB1 728 aaPredicted RBP11.58□□□□□ -0.56
PFDN1-205ENST00000512925 PSPC1Q8WXF1 523 aaKnown RBP11.58□□□□□ -0.56
PFDN1-205ENST00000512925 SLC7A3Q8WY07 619 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 CPB2Q96IY4 423 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 PAAF1Q9BRP4 392 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 PHF20Q9BVI0 1012 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 FAM126AQ9BYI3 521 aaPredicted RBP11.58□□□□□ -0.56
PFDN1-205ENST00000512925 CSRNP2Q9H175 543 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 HCFC1R1Q9NWW0 138 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
PFDN1-205ENST00000512925 CACNG4Q9UBN1 327 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.56
PFDN1-205ENST00000512925 NID2Q14112 1375 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 M0R2N6 131 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 ASAP2O43150 1006 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 ADAM12O43184 909 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 CDC45O75419 566 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 TADA2AO75478 443 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 C8AP07357 584 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 AKAP5P24588 427 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 AXLP30530 894 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 QARSP47897 775 aaKnown RBP11.57□□□□□ -0.56
PFDN1-205ENST00000512925 PTENP60484 403 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 ADCY1Q08828 1119 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 PCBP1Q15365 356 aaKnown RBP eCLIP11.57□□□□□ -0.566e-7■■■□□ 15.8
PFDN1-205ENST00000512925 LPAL2Q16609 132 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 NETO1Q8TDF5 533 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 PIK3R5Q8WYR1 880 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 CEP170P1Q96L14 293 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
PFDN1-205ENST00000512925 HEBP1Q9NRV9 189 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 GMEB2Q9UKD1 530 aa11.57□□□□□ -0.56
PFDN1-205ENST00000512925 RALYQ9UKM9 306 aaKnown RBP11.57□□□□□ -0.56
PFDN1-205ENST00000512925 VAV3Q9UKW4 847 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms