RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ARHGAP4P98171 946 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 NRG1Q02297 640 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 HDAC1Q13547 482 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 GRIK4Q16099 956 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 NKAPLQ5M9Q1 402 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 FBXO47Q5MNV8 452 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 CELF3Q5SZQ8 465 aaKnown RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 FAM102BQ5T8I3 360 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 TMC5Q6UXY8 1006 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 OTOP3Q7RTS5 596 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 CHD1LQ86WJ1 897 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 ANKMY2Q8IV38 441 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 MRPL43Q8N983 215 aaKnown RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 ST13P5Q8NFI4 369 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 NELL1Q92832 810 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 MAP4K1Q92918 833 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 ACSF2Q96CM8 615 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 BORCS6Q96GS4 357 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 KRT23Q9C075 422 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 RWDD1Q9H446 243 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 CWH43Q9H720 699 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 VRTNQ9H8Y1 702 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 NGRNQ9NPE2 291 aaKnown RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 TPSG1Q9NRR2 321 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 IGSF5Q9NSI5 407 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 SEMA4GQ9NTN9 838 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 TYW1Q9NV66 732 aaKnown RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 ZSCAN32Q9NX65 697 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 DNAJB12Q9NXW2 375 aaKnown RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 MAD2L2Q9UI95 211 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 GMEB2Q9UKD1 530 aa6.35□□□□□ -1.39
SPTA1-209ENST00000498708 MTF2Q9Y483 593 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-209ENST00000498708 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 A0A0A0MRY4 1105 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 TBKBP1A7MCY6 615 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 IFIT3O14879 490 aaKnown RBP6.34□□□□□ -1.39
SPTA1-209ENST00000498708 ZBTB5O15062 677 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 RGS9O75916 674 aaPredicted RBP6.34□□□□□ -1.39
SPTA1-209ENST00000498708 MAP3K6O95382 1288 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 STAG3L1P0CL83 205 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 SRFP11831 508 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 NFKB1P19838 968 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 CCND2P30279 289 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 PBX3P40426 434 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 PLCB3Q01970 1234 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 SEC23AQ15436 765 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 CCDC6Q16204 474 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 SLC35G1Q2M3R5 365 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 DCLRE1AQ6PJP8 1040 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 TSHZ1Q6ZSZ6 1077 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 CYFIP1Q7L576 1253 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 TMC7Q7Z402 723 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 VSIG10LQ86VR7 867 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 EXOC6Q8TAG9 804 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 LMBR1Q8WVP7 490 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 ZMYND15Q9H091 742 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 TMX1Q9H3N1 280 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.34□□□□□ -1.39
SPTA1-209ENST00000498708 ARHGEF3Q9NR81 526 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 IGSF9Q9P2J2 1179 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 LZTS1Q9Y250 596 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 CDY2AQ9Y6F7 541 aa6.34□□□□□ -1.39
SPTA1-209ENST00000498708 DOCK8Q8NF50 2099 aa6.34□□□□□ -1.4
SPTA1-209ENST00000498708 CYTH3O43739 400 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 HMGB1P09429 215 aaKnown RBP6.33□□□□□ -1.4
SPTA1-209ENST00000498708 GNAT1P11488 350 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 SCG2P13521 617 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 ITGB7P26010 798 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 MARK3P27448 753 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 STARD6P59095 220 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 IGBP1P78318 339 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 MRPS9P82933 396 aaKnown RBP6.33□□□□□ -1.4
SPTA1-209ENST00000498708 NUCB1Q02818 461 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 PTH1RQ03431 593 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 TRDNQ13061 729 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 GRM4Q14833 912 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 WTAPQ15007 396 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 IL31Q6EBC2 164 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 PSAPL1Q6NUJ1 521 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 LRRC55Q6ZSA7 311 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 CCDC149Q6ZUS6 474 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 STOX1Q6ZVD7 989 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 GPR149Q86SP6 731 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 SMC5Q8IY18 1101 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 SMARCC2Q8TAQ2 1214 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 SLC22A17Q8WUG5 538 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 NUDT8Q8WV74 236 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 DNAJB3Q8WWF6 145 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 AUTS2Q8WXX7 1259 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
SPTA1-209ENST00000498708 ZBTB10Q96DT7 871 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 BBC3Q96PG8 261 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-209ENST00000498708 MYL10Q9BUA6 226 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 DSCC1Q9BVC3 393 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 CNNM2Q9H8M5 875 aa6.33□□□□□ -1.4
SPTA1-209ENST00000498708 PUF60Q9UHX1 559 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms