RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PTPRHQ9HD43 1115 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 LRFN2Q9ULH4 789 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 PCDHB7Q9Y5E2 793 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 PCDHB2Q9Y5E7 798 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 SLC4A7Q9Y6M7 1214 aa21.89■■□□□ 1.09
CTSD-206ENST00000497544 ZNF623O75123 536 aa21.88■■□□□ 1.09
CTSD-206ENST00000497544 HARSP12081 509 aaKnown RBP21.88■■□□□ 1.09
CTSD-206ENST00000497544 PROZP22891 400 aa21.88■■□□□ 1.09
CTSD-206ENST00000497544 SNRPFP62306 86 aaKnown RBP21.88■■□□□ 1.09
CTSD-206ENST00000497544 ECHDC2Q86YB7 292 aa21.88■■□□□ 1.09
CTSD-206ENST00000497544 HACE1Q8IYU2 909 aa21.88■■□□□ 1.09
CTSD-206ENST00000497544 RNF169Q8NCN4 708 aa21.88■■□□□ 1.09
CTSD-206ENST00000497544 CDT1Q9H211 546 aa21.88■■□□□ 1.09
CTSD-206ENST00000497544 CGNQ9P2M7 1197 aaKnown RBP21.88■■□□□ 1.09
CTSD-206ENST00000497544 UPP2O95045 317 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 EOMESO95936 686 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 MCF2P10911 925 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 BMP6P22004 513 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 NLRP12P59046 1061 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 MCL1Q07820 350 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 NOLC1Q14978 699 aaKnown RBP eCLIP21.87■■□□□ 1.091e-8■□□□□ 8.1
CTSD-206ENST00000497544 ARMCX5Q6P1M9 558 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 SLC39A4Q6P5W5 647 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 ADSSL1Q8N142 457 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 GOLGA5Q8TBA6 731 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 PGBD4Q96DM1 585 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 FBXL18Q96ME1 805 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 ELAC1Q9H777 363 aaKnown RBP21.87■■□□□ 1.09
CTSD-206ENST00000497544 TYW1Q9NV66 732 aaKnown RBP21.87■■□□□ 1.09
CTSD-206ENST00000497544 COG5Q9UP83 839 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 IPPQ9Y573 584 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 STYXL1Q9Y6J8 313 aa21.87■■□□□ 1.09
CTSD-206ENST00000497544 TISP43B9A030 160 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 PDXKO00764 312 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 ABLIM1O14639 778 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 PSMA7O14818 248 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 CALUO43852 315 aaPredicted RBP21.86■■□□□ 1.09
CTSD-206ENST00000497544 ITGA4P13612 1032 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 GARTP22102 1010 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 DEFB103AP81534 67 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 MRPL10Q7Z7H8 261 aaKnown RBP21.86■■□□□ 1.09
CTSD-206ENST00000497544 NPAS4Q8IUM7 802 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 THNSL1Q8IYQ7 743 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 MLKLQ8NB16 471 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 DHTKD1Q96HY7 919 aaPredicted RBP21.86■■□□□ 1.09
CTSD-206ENST00000497544 MSTO1Q9BUK6 570 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 APOL6Q9BWW8 343 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 KCTD10Q9H3F6 313 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 TMEM161AQ9NX61 479 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 AGO2Q9UKV8 859 aaKnown RBP21.86■■□□□ 1.09
CTSD-206ENST00000497544 USP34Q70CQ2 3546 aa21.86■■□□□ 1.09
CTSD-206ENST00000497544 A0A0B4J269 797 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 PPP1R3GB7ZBB8 358 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 CLIC2O15247 247 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 TGFB1I1O43294 461 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 KYAT1Q16773 422 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 KLHL10Q6JEL2 608 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 SMG8Q8ND04 991 aaKnown RBP21.85■■□□□ 1.09
CTSD-206ENST00000497544 PHOSPHO2Q8TCD6 241 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 TOP1MTQ969P6 601 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 TSG101Q99816 390 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 CCDC94Q9BW85 323 aaPredicted RBP21.85■■□□□ 1.09
CTSD-206ENST00000497544 PCIF1Q9H4Z3 704 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 AGPAT3Q9NRZ7 376 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 PARP2Q9UGN5 583 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 DACH1Q9UI36 760 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 HES2Q9Y543 173 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 MTCH2Q9Y6C9 303 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 ZMYM2Q9UBW7 1377 aa21.85■■□□□ 1.09
CTSD-206ENST00000497544 KIAA0391O15091 583 aaKnown RBP21.84■■□□□ 1.09
CTSD-206ENST00000497544 OGTO15294 1046 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 LDHAP00338 332 aaKnown RBP21.84■■□□□ 1.09
CTSD-206ENST00000497544 CD44P16070 742 aaKnown RBP21.84■■□□□ 1.09
CTSD-206ENST00000497544 ADSSP30520 456 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 OSTNP61366 133 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 PPP2R2DQ66LE6 453 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 ACAP3Q96P50 834 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 SLC9A7Q96T83 725 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 CBWD1Q9BRT8 395 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 ZBED2Q9BTP6 218 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 HAPLN2Q9GZV7 340 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 ANO10Q9NW15 660 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 SNTG2Q9NY99 539 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 TRAF3IP3Q9Y228 551 aa21.84■■□□□ 1.09
CTSD-206ENST00000497544 ATP2A2P16615 1042 aaKnown RBP21.83■■□□□ 1.09
CTSD-206ENST00000497544 CCNE1P24864 410 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 GRM5P41594 1212 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 RABGGTBP53611 331 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 YARSP54577 528 aaKnown RBP21.83■■□□□ 1.09
CTSD-206ENST00000497544 CENPPQ6IPU0 288 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 FAM117BQ6P1L5 589 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 ZNF598Q86UK7 904 aaKnown RBP21.83■■□□□ 1.09
CTSD-206ENST00000497544 NOC3LQ8WTT2 800 aaKnown RBP21.83■■□□□ 1.09
CTSD-206ENST00000497544 NELFBQ8WX92 580 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 LPPQ93052 612 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 P2RX5Q93086 422 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 NXF3Q9H4D5 531 aaKnown RBP21.83■■□□□ 1.09
CTSD-206ENST00000497544 UBN1Q9NPG3 1134 aa21.83■■□□□ 1.09
CTSD-206ENST00000497544 BRWD1Q9NSI6 2320 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 BICDL2A1A5D9 508 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms