RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TBKBP1A7MCY6 615 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 PRR5-ARHGAP8B1AHC4 643 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 B5MCH6 92 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 ALOX15P16050 662 aaPredicted RBP7.13□□□□□ -1.27
LTN1-206ENST00000486427 C5AR1P21730 350 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 FLT3LGP49771 235 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 ACAP2Q15057 778 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 RABL3Q5HYI8 236 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 FAM47AQ5JRC9 791 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 FAM180AQ6UWF9 173 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 PDZD4Q76G19 769 aaPredicted RBP7.13□□□□□ -1.27
LTN1-206ENST00000486427 SYT12Q8IV01 421 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 RNF169Q8NCN4 708 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 ZCRB1Q8TBF4 217 aaKnown RBP7.13□□□□□ -1.27
LTN1-206ENST00000486427 NRG4Q8WWG1 115 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 STON2Q8WXE9 905 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 DPF2Q92785 391 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 UHRF1Q96T88 793 aaPredicted RBP7.13□□□□□ -1.27
LTN1-206ENST00000486427 ASPSCR1Q9BZE9 553 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 SCAND2PQ9GZW5 306 aaPredicted RBP7.13□□□□□ -1.27
LTN1-206ENST00000486427 SPON1Q9HCB6 807 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 SORCS3Q9UPU3 1222 aa7.13□□□□□ -1.27
LTN1-206ENST00000486427 SHTN1A0MZ66 631 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 CXorf49A8MYA2 514 aaPredicted RBP7.12□□□□□ -1.27
LTN1-206ENST00000486427 LEFTY2O00292 366 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 NARSO43776 548 aaKnown RBP7.12□□□□□ -1.27
LTN1-206ENST00000486427 NDUFS2O75306 463 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 FSHBP01225 129 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 APOBEC3AP31941 199 aaPredicted RBP7.12□□□□□ -1.27
LTN1-206ENST00000486427 GUCY1A2P33402 732 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 PER3P56645 1201 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 TUBA3CQ13748 450 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 BMT2Q1RMZ1 405 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 TUBA3EQ6PEY2 450 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 RPUSD2Q8IZ73 545 aaKnown RBP7.12□□□□□ -1.27
LTN1-206ENST00000486427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.12□□□□□ -1.27
LTN1-206ENST00000486427 NDC1Q9BTX1 674 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 BRINP2Q9C0B6 783 aa7.12□□□□□ -1.27
LTN1-206ENST00000486427 XPOTO43592 962 aaKnown RBP7.11□□□□□ -1.27
LTN1-206ENST00000486427 FPR1P21462 350 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 OR10H5Q8NGA6 315 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 SSH1Q8WYL5 1049 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 SMAD5Q99717 465 aaKnown RBP7.11□□□□□ -1.27
LTN1-206ENST00000486427 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 SLC2A4RGQ9NR83 387 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 INTUQ9ULD6 942 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 HS3ST3A1Q9Y663 406 aa7.11□□□□□ -1.27
LTN1-206ENST00000486427 PNPLA7Q6ZV29 1317 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 KLHL33A6NCF5 533 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 AHRRA9YTQ3 701 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 ENDOD1O94919 500 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 ZNF202O95125 648 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 NR4A1P22736 598 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 ACVRL1P37023 503 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 SP140Q13342 867 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 ODF1Q14990 250 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 PTPN21Q16825 1174 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 BRDTQ58F21 947 aaPredicted RBP7.1□□□□□ -1.27
LTN1-206ENST00000486427 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
LTN1-206ENST00000486427 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 DRICH1Q6PGQ1 229 aaPredicted RBP7.1□□□□□ -1.27
LTN1-206ENST00000486427 SLC16A11Q8NCK7 471 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 CPT1CQ8TCG5 803 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 TFAP2CQ92754 450 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 TEKT5Q96M29 485 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 SENP6Q9GZR1 1112 aaPredicted RBP7.1□□□□□ -1.27
LTN1-206ENST00000486427 ZNF768Q9H5H4 540 aaKnown RBP7.1□□□□□ -1.27
LTN1-206ENST00000486427 LANCL2Q9NS86 450 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 GPRC5BQ9NZH0 403 aa7.1□□□□□ -1.27
LTN1-206ENST00000486427 AJAP1Q9UKB5 411 aaPredicted RBP7.1□□□□□ -1.27
LTN1-206ENST00000486427 AKAP8O43823 692 aaKnown RBP7.09□□□□□ -1.27
LTN1-206ENST00000486427 FZD7O75084 574 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 RPS6KA4O75676 772 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 SCAF4O95104 1147 aaKnown RBP7.09□□□□□ -1.27
LTN1-206ENST00000486427 AMY1AP04745 511 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 PCSK1P29120 753 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 WASP42768 502 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 ALDH1A3P47895 512 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 EFCAB12Q6NXP0 572 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 ZGPATQ8N5A5 531 aaKnown RBP7.09□□□□□ -1.27
LTN1-206ENST00000486427 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.09□□□□□ -1.27
LTN1-206ENST00000486427 CCHCR1Q8TD31 782 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 HOMER2Q9NSB8 354 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 EIF2B4Q9UI10 523 aaKnown RBP7.09□□□□□ -1.27
LTN1-206ENST00000486427 CLCA2Q9UQC9 943 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 NOP58Q9Y2X3 529 aaKnown RBP7.09□□□□□ -1.27
LTN1-206ENST00000486427 ACTL7AQ9Y615 435 aa7.09□□□□□ -1.27
LTN1-206ENST00000486427 FAM171A2A8MVW0 826 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 TRIM24O15164 1050 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 PJA2O43164 708 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 RAP2AP10114 183 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 ZFP36P26651 326 aaKnown RBP7.08□□□□□ -1.28
LTN1-206ENST00000486427 CLRN1P58418 232 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 KRT85P78386 507 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 FAM189BP81408 668 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 NHLH2Q02577 135 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 METRNLQ641Q3 311 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 ZNF276Q8N554 614 aa7.08□□□□□ -1.28
LTN1-206ENST00000486427 ZNF483Q8TF39 744 aaPredicted RBP7.08□□□□□ -1.28
LTN1-206ENST00000486427 NEU1Q99519 415 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms