RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PRKD2Q9BZL6 878 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 CXCL16Q9H2A7 254 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 TBC1D17Q9HA65 648 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 SLC2A4RGQ9NR83 387 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 DPP7Q9UHL4 492 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 FBXW11Q9UKB1 542 aa12.15□□□□□ -0.46
COL11A1-207ENST00000465209 CEP250Q9BV73 2442 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 ZMYND10O75800 440 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 NPTXRO95502 500 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 EDN1P05305 212 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 PRSS55Q6UWB4 352 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-207ENST00000465209 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-207ENST00000465209 GLYCTKQ8IVS8 523 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-207ENST00000465209 CLSTN3Q9BQT9 956 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 COLEC11Q9BWP8 271 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 POLR3FQ9H1D9 316 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-207ENST00000465209 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL11A1-207ENST00000465209 KLK14Q9P0G3 267 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 NUMBLQ9Y6R0 609 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 GPR179Q6PRD1 2367 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 COL4A2P08572 1712 aa12.14□□□□□ -0.47
COL11A1-207ENST00000465209 POTEMA6NI47 508 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 KIF4AO95239 1232 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 LARGE1O95461 756 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 SPATA31C1P0DKV0 1188 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 XBP1P17861 261 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 KRT2P35908 639 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-207ENST00000465209 CALCRLQ16602 461 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 FAM187BQ17R55 369 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 ELMSAN1Q6PJG2 1045 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 LNX1Q8TBB1 728 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-207ENST00000465209 PIGOQ8TEQ8 1089 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 FGF14Q92915 247 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 RPP25Q9BUL9 199 aaKnown RBP12.13□□□□□ -0.47
COL11A1-207ENST00000465209 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-207ENST00000465209 FZD8Q9H461 694 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 TTC12Q9H892 705 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-207ENST00000465209 ARHGEF3Q9NR81 526 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-207ENST00000465209 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
COL11A1-207ENST00000465209 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 A0A087WWV3 80 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 ADAM12O43184 909 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 NR1I2O75469 434 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 BAG4O95429 457 aaKnown RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 DCNP07585 359 aaKnown RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 IGFBP6P24592 240 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 ID4P47928 161 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 STARD6P59095 220 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 CREMQ03060 361 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 TUSC3Q13454 348 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 PARM1Q6UWI2 310 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 HACE1Q8IYU2 909 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 MAML2Q8IZL2 1156 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 ST13P5Q8NFI4 369 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 HASPINQ8TF76 798 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 BSNDQ8WZ55 320 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 GTF3C6Q969F1 213 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 DDX23Q9BUQ8 820 aaKnown RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 R4GN57 208 aa12.12□□□□□ -0.47
COL11A1-207ENST00000465209 PDCD11Q14690 1871 aaKnown RBP12.12□□□□□ -0.47
COL11A1-207ENST00000465209 CASTOR2A6NHX0 329 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 MARCH6O60337 910 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 NEMFO60524 1076 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 MED24O75448 989 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 RECQL4O94761 1208 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 POU2F2P09086 479 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL11A1-207ENST00000465209 HOXA9P31269 272 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 NTHL1P78549 312 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
COL11A1-207ENST00000465209 ME3Q16798 604 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 GRASPQ7Z6J2 395 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-207ENST00000465209 NSUN7Q8NE18 718 aaKnown RBP12.11□□□□□ -0.47
COL11A1-207ENST00000465209 TTPALQ9BTX7 342 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 SEMA4AQ9H3S1 761 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 PIDD1Q9HB75 910 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
COL11A1-207ENST00000465209 ZFP37Q9Y6Q3 630 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-207ENST00000465209 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 LRRN2O75325 713 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 TADA2AO75478 443 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 LMNAP02545 664 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms