RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 TTLL1O95922 423 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 GNAT1P11488 350 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CSRP1P21291 193 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 PPM1AP35813 382 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 SARSP49591 514 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 SLC44A4Q53GD3 710 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 FAM102BQ5T8I3 360 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CTR9Q6PD62 1173 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 KCNT2Q6UVM3 1135 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 WDR63Q8IWG1 891 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 ZNF843Q8N446 348 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CMASQ8NFW8 434 aaPredicted RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 LMBR1Q8WVP7 490 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 HNRNPLLQ8WVV9 542 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 LRIG1Q96JA1 1093 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 NSUN5Q96P11 429 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 NELL2Q99435 816 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 TMX1Q9H3N1 280 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CLMPQ9H6B4 373 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 ZFP64Q9NPA5 681 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 SETD4Q9NVD3 440 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 DBNLQ9UJU6 430 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 HDAC5Q9UQL6 1122 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 SUPT16HQ9Y5B9 1047 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 NUMBLQ9Y6R0 609 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 ABCA12Q86UK0 2595 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 UBR5O95071 2799 aaPredicted RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 SPAG17Q6Q759 2223 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 SDK1Q7Z5N4 2213 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 PLIN4Q96Q06 1357 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 LAMP2P13473 410 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CD72P21854 359 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 GBP2P32456 591 aaPredicted RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 SLC1A4P43007 532 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 KRT17Q04695 432 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 SRSF5Q13243 272 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 NAA30Q147X3 362 aaPredicted RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 SLC9C2Q5TAH2 1124 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 RNF43Q68DV7 783 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 TAF2Q6P1X5 1199 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 LRRC55Q6ZSA7 311 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 IL22RA1Q8N6P7 574 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 LOXL4Q96JB6 756 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 MEGF10Q96KG7 1140 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 IER2Q9BTL4 223 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 RPP25Q9BUL9 199 aaKnown RBP3.83□□□□□ -1.8
PMS1-215ENST00000447232 ARRDC1-AS1Q9H2J1 176 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CHRDQ9H2X0 955 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 ARMT1Q9H993 441 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 CLUHO75153 1309 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 ZNF532Q9HCE3 1301 aa3.83□□□□□ -1.8
PMS1-215ENST00000447232 COL12A1Q99715 3063 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 NCAM2O15394 837 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 EPN2O95208 641 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 ATG7O95352 703 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 GHRHP01286 108 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 LGALS2P05162 132 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 PBX3P40426 434 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 RAP1GAPP47736 663 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 IKQ13123 557 aaPredicted RBP3.82□□□□□ -1.8
PMS1-215ENST00000447232 SETDB1Q15047 1291 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 CELF3Q5SZQ8 465 aaKnown RBP3.82□□□□□ -1.8
PMS1-215ENST00000447232 RCSD1Q6JBY9 416 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 KIAA1211LQ6NV74 962 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 CYP26C1Q6V0L0 522 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 FAM43BQ6ZT52 329 aaPredicted RBP3.82□□□□□ -1.8
PMS1-215ENST00000447232 SLC39A11Q8N1S5 342 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 TMEM130Q8N3G9 435 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 LSM14AQ8ND56 463 aaKnown RBP3.82□□□□□ -1.8
PMS1-215ENST00000447232 RGS22Q8NE09 1264 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 STAMQ92783 540 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 SPATA33Q96N06 139 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 MKNK1Q9BUB5 465 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 ZBP1Q9H171 429 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 SPG21Q9NZD8 308 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 PADI3Q9ULW8 664 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 PCDHB7Q9Y5E2 793 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 CDY2AQ9Y6F7 541 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 PCNX2A6NKB5 2137 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 KAT6AQ92794 2004 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.82□□□□□ -1.8
PMS1-215ENST00000447232 ZBTB39O15060 712 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 CXCL14O95715 111 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 MCCP23508 829 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 CCR3P51677 355 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 RARSP54136 660 aaKnown RBP3.82□□□□□ -1.8
PMS1-215ENST00000447232 ADCY1Q08828 1119 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 SCAPQ12770 1279 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 G3BP1Q13283 466 aaKnown RBP eCLIP3.82□□□□□ -1.8
PMS1-215ENST00000447232 GIT2Q14161 759 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 PPP2R5DQ14738 602 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 STXBP2Q15833 593 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 TMEM164Q5U3C3 297 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 BTNL9Q6UXG8 535 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 KCTD1Q719H9 257 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 PPFIBP1Q86W92 1011 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 AMOTL1Q8IY63 956 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 OR13H1Q8NG92 308 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 ZNF558Q96NG5 402 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 IWS1Q96ST2 819 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms