RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 FBXW11Q9UKB1 542 aa17.1■□□□□ 0.33
DDX56-202ENST00000415758 FRYLO94915 3013 aa17.1■□□□□ 0.33
DDX56-202ENST00000415758 TADA2AO75478 443 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 HNRNPA1P09651 372 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDX56-202ENST00000415758 GLULP15104 373 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
DDX56-202ENST00000415758 GLRA2P23416 452 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 STK3Q13188 491 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 RTP2Q5QGT7 225 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 SHDQ96IW2 340 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
DDX56-202ENST00000415758 STK36Q9NRP7 1315 aa17.09■□□□□ 0.33
DDX56-202ENST00000415758 MYH15Q9Y2K3 1946 aa17.08■□□□□ 0.33
DDX56-202ENST00000415758 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.325e-6■■■■■ 61.3
DDX56-202ENST00000415758 B4GALT5O43286 388 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDX56-202ENST00000415758 FSHRP23945 695 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 HOXA9P31269 272 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 GPC5P78333 572 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 SCRN1Q12765 414 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 HSP90AA2PQ14568 343 aaPredicted RBP17.08■□□□□ 0.32
DDX56-202ENST00000415758 EARS2Q5JPH6 523 aaKnown RBP17.08■□□□□ 0.32
DDX56-202ENST00000415758 KIAA2013Q8IYS2 634 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 MAML2Q8IZL2 1156 aaPredicted RBP17.08■□□□□ 0.32
DDX56-202ENST00000415758 PIK3R5Q8WYR1 880 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 RUBCNQ92622 972 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 FGF14Q92915 247 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 CLSTN3Q9BQT9 956 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 RPP25Q9BUL9 199 aaKnown RBP17.08■□□□□ 0.32
DDX56-202ENST00000415758 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
DDX56-202ENST00000415758 CDH7Q9ULB5 785 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.32
DDX56-202ENST00000415758 NPTXRO95502 500 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 RARRES1P49788 294 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 TUSC3Q13454 348 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 ZNF528Q3MIS6 628 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
DDX56-202ENST00000415758 PARM1Q6UWI2 310 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 GRASPQ7Z6J2 395 aaPredicted RBP17.07■□□□□ 0.32
DDX56-202ENST00000415758 CDR2LQ86X02 465 aaPredicted RBP17.07■□□□□ 0.32
DDX56-202ENST00000415758 SUMF1Q8NBK3 374 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 LNX1Q8TBB1 728 aaPredicted RBP17.07■□□□□ 0.32
DDX56-202ENST00000415758 RABGGTAQ92696 567 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 PAAF1Q9BRP4 392 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 TTPALQ9BTX7 342 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 KLK14Q9P0G3 267 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 PARP2Q9UGN5 583 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 CEP250Q9BV73 2442 aa17.07■□□□□ 0.32
DDX56-202ENST00000415758 MIA3Q5JRA6 1907 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 KANSL1LA0AUZ9 987 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 POU2F2P09086 479 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 PUM1Q14671 1186 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX56-202ENST00000415758 FAM187BQ17R55 369 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 MTSS1LQ765P7 747 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 FGF13Q92913 245 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 TNFRSF25Q93038 417 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 OSBPL6Q9BZF3 934 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 FOXQ1Q9C009 403 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 FZD8Q9H461 694 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 DLL3Q9NYJ7 618 aa17.06■□□□□ 0.32
DDX56-202ENST00000415758 POTEMA6NI47 508 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 PRKCQQ04759 706 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 ELAVL2Q12926 359 aaKnown RBP17.05■□□□□ 0.32
DDX56-202ENST00000415758 NAB2Q15742 525 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 UVSSAQ2YD98 709 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 PPM1LQ5SGD2 360 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 LIN9Q5TKA1 542 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 FAM171A1Q5VUB5 890 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 PDXDC1Q6P996 788 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
DDX56-202ENST00000415758 RTL10Q7L3V2 364 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 DGLUCYQ7Z3D6 616 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 POLR3FQ9H1D9 316 aaPredicted RBP17.05■□□□□ 0.32
DDX56-202ENST00000415758 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
DDX56-202ENST00000415758 PRMT7Q9NVM4 692 aaPredicted RBP17.05■□□□□ 0.32
DDX56-202ENST00000415758 CACNG4Q9UBN1 327 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
DDX56-202ENST00000415758 FBXO4Q9UKT5 387 aa17.05■□□□□ 0.32
DDX56-202ENST00000415758 NOTCH4Q99466 2003 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 MED19A0JLT2 244 aaPredicted RBP17.04■□□□□ 0.32
DDX56-202ENST00000415758 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 PTGESO14684 152 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 PFKFB2O60825 505 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 LRRN2O75325 713 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 KIF4AO95239 1232 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 THP07101 528 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 C8AP07357 584 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 NTHL1P78549 312 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
DDX56-202ENST00000415758 PSMD5Q16401 504 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 SLC44A4Q53GD3 710 aa17.04■□□□□ 0.32
DDX56-202ENST00000415758 CDCA2Q69YH5 1023 aaPredicted RBP17.04■□□□□ 0.32
DDX56-202ENST00000415758 ST13P5Q8NFI4 369 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms