RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 TRIM49P0CI25 452 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 TRIM49CP0CI26 452 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 GNAZP19086 355 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 CALB2P22676 271 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 RXRBP28702 533 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 MRPS35P82673 323 aaKnown RBP19.44■□□□□ 0.7
KRCC1-201ENST00000347055 PTP4A2Q12974 167 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 LRRC14Q15048 493 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 FBXO11Q86XK2 927 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 UHMK1Q8TAS1 419 aaKnown RBP19.44■□□□□ 0.7
KRCC1-201ENST00000347055 EPS8L1Q8TE68 723 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 DDX23Q9BUQ8 820 aaKnown RBP19.44■□□□□ 0.7
KRCC1-201ENST00000347055 UBE2TQ9NPD8 197 aaPredicted RBP19.44■□□□□ 0.7
KRCC1-201ENST00000347055 NDC80O14777 642 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 ACSL3O95573 720 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 ATF2P15336 505 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 TAC1P20366 129 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 IVDP26440 423 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 ALDH3A1P30838 453 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 SLC1A1P43005 524 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 CYP2J2P51589 502 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 UBAP2Q5T6F2 1119 aaKnown RBP19.44■□□□□ 0.7
KRCC1-201ENST00000347055 CGB2Q6NT52 195 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 TDRPQ86YL5 185 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 LMNTD2Q8IXW0 634 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 MGARPQ8TDB4 240 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 RMDN2Q96LZ7 410 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 SH3GL3Q99963 347 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 NUP85Q9BW27 656 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 ZFATQ9P243 1243 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 ASIC3Q9UHC3 531 aa19.44■□□□□ 0.7
KRCC1-201ENST00000347055 FAM47DPA6NHR8 397 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 TMEM110-MUSTN1A8MSY1 372 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 PRPF4O43172 522 aaKnown RBP eCLIP19.43■□□□□ 0.7
KRCC1-201ENST00000347055 LRRN2O75325 713 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 CYP4A11Q02928 519 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 PICALMQ13492 652 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 TAF11Q15544 211 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 SLFN13Q68D06 897 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 OTOP1Q7RTM1 612 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 ECHDC2Q86YB7 292 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 ZNF398Q8TD17 642 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 FBXO41Q8TF61 875 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 PRCCQ92733 491 aaPredicted RBP19.43■□□□□ 0.7
KRCC1-201ENST00000347055 GMCL1Q96IK5 515 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 PITPNM3Q9BZ71 974 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 ETNK1Q9HBU6 452 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 CYP39A1Q9NYL5 469 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 NINJ2Q9NZG7 142 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 PNMA3Q9UL41 463 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 SYNPO2Q9UMS6 1093 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 SMG5Q9UPR3 1016 aaKnown RBP19.43■□□□□ 0.7
KRCC1-201ENST00000347055 STK38LQ9Y2H1 464 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 PTPN22Q9Y2R2 807 aa19.43■□□□□ 0.7
KRCC1-201ENST00000347055 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 SLITRK3O94933 977 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 CHRNB2P17787 502 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 VAMP7P51809 220 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 PRELPP51888 382 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 LBRQ14739 615 aaKnown RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 RASA2Q15283 850 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 SGSM1Q2NKQ1 1148 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ZC2HC1CQ53FD0 456 aaPredicted RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 CLEC10AQ8IUN9 316 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 KIF2BQ8N4N8 673 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ANKRD42Q8N9B4 389 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ATL2Q8NHH9 583 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 PIGOQ8TEQ8 1089 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ZNF483Q8TF39 744 aaPredicted RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 STK32AQ8WU08 396 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 RPGRQ92834 1020 aaKnown RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 SLC5A5Q92911 643 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 WDR11Q9BZH6 1224 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 TCRBV7S2A1N4TA0A589 114 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 EML1O00423 815 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 AHCYL1O43865 530 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 PSMD10O75832 226 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ZNF76P36508 570 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 CCNHP51946 323 aaPredicted RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 MGAT5Q09328 741 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ODR4Q5SWX8 454 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 SYDE2Q5VT97 1194 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 OTUD6AQ7L8S5 288 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 EMSYQ7Z589 1322 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 CCDC89Q8N998 374 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 CNBD1Q8NA66 436 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 MICAL1Q8TDZ2 1067 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 TRIM11Q96F44 468 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 TTC25Q96NG3 672 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 P2RX7Q99572 595 aaKnown RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 AVENQ9NQS1 362 aaPredicted RBP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 ANAPC5Q9UJX4 755 aa19.42■□□□□ 0.7
KRCC1-201ENST00000347055 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.42■□□□□ 0.7
KRCC1-201ENST00000347055 BBOX1O75936 387 aa19.41■□□□□ 0.7
KRCC1-201ENST00000347055 FESP07332 822 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms