RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SSTR3P32745 418 aaPredicted RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 RAB44Q7Z6P3 723 aaPredicted RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 RBBP8NLQ8NC74 664 aaPredicted RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 SYNPO2Q9UMS6 1093 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 RECQLP46063 649 aaPredicted RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 AGO4Q9HCK5 861 aaKnown RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 SSU72P8A0A1W2PR75 194 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 PPP1R3GB7ZBB8 358 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 CDK17Q00537 523 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 SLC18A3Q16572 532 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 CRY2Q49AN0 593 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 OSBPL9Q96SU4 736 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 KIFC3Q9BVG8 833 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 UBN1Q9NPG3 1134 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 SLC26A2P50443 739 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 KPNA2P52292 529 aaKnown RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 ZNF211Q13398 564 aaPredicted RBP20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 PDLIM2Q96JY6 352 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 WDR35Q9P2L0 1181 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 KRT3P12035 628 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 GRIK1P39086 918 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 CDCA5Q96FF9 252 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 AGPAT3Q9NRZ7 376 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 DHX35Q9H5Z1 703 aaKnown RBP20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 GPRC5DQ9NZD1 345 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 BCAR1P56945 870 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 GRIK5Q16478 980 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 PCGF5Q86SE9 256 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 CERS5Q8N5B7 392 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 MRC1P22897 1456 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 RASGRF2O14827 1237 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 ARL4CP56559 192 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 PGM5Q15124 567 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 SV2CQ496J9 727 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 EMBQ6PCB8 327 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 C1orf228Q6PIY5 440 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 TRIM42Q8IWZ5 723 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 SNX24Q9Y343 169 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 TACC3Q9Y6A5 838 aa20.81■□□□□ 0.92
SEMA6C-201ENST00000341697 NPTXRO95502 500 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 MOCS2O96007 188 aaPredicted RBP20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 CALRP27797 417 aaKnown RBP20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 EIF3BP55884 814 aaKnown RBP20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 NOP14P78316 857 aaKnown RBP20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 MAP7Q14244 749 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 DCAF4L1Q3SXM0 396 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 METTL7BQ6UX53 244 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 NUDCD1Q96RS6 583 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 NFU1Q9UMS0 254 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 SLC9A1P19634 815 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 TSTA3Q13630 321 aaPredicted RBP20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 NFRKBQ6P4R8 1299 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 FHOD1Q9Y613 1164 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 H3BRJ5 948 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 NCK2O43639 380 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 STRNO43815 780 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 EVI5O60447 810 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 NAMPTP43490 491 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 ASPHQ12797 758 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 HDAC11Q96DB2 347 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 UPP2O95045 317 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 TGFB3P10600 412 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 PMLP29590 882 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 SLC1A1P43005 524 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 ANGPTL3Q9Y5C1 460 aa20.8■□□□□ 0.92
SEMA6C-201ENST00000341697 GRID2IPA4D2P6 1211 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 C4orf19Q8IY42 314 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 GDAP1Q8TB36 358 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 DEPDC1BQ8WUY9 529 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 P2RX7Q99572 595 aaKnown RBP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 AGPAT5Q9NUQ2 364 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 LMCD1Q9NZU5 365 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 NKRFO15226 690 aaKnown RBP eCLIP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 PPARGP37231 505 aaPredicted RBP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 SLCO1A2P46721 670 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 PRPF31Q8WWY3 499 aaKnown RBP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 GPRC5CQ9NQ84 441 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 NFAT5O94916 1531 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 KNDC1Q76NI1 1749 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 NT5C1AQ9BXI3 368 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 ALS2CLQ60I27 953 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 LBHD1Q9BQE6 289 aaPredicted RBP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 ASCC2Q9H1I8 757 aaPredicted RBP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 DNAJC17Q9NVM6 304 aaKnown RBP20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 KBTBD4Q9NVX7 518 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 UVRAGQ9P2Y5 699 aa20.79■□□□□ 0.92
SEMA6C-201ENST00000341697 RSPH10B2B2RC85 870 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 PDGFRBP09619 1106 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 RSPH10BP0C881 870 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 IFNAR2P48551 515 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 CHP1Q99653 195 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 NIF3L1Q9GZT8 377 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 SIK2Q9H0K1 926 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 TBK1Q9UHD2 729 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 PCDHB2Q9Y5E7 798 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 IFT172Q9UG01 1749 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 F8W8V4 182 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 PTPRAP18433 802 aa20.78■□□□□ 0.92
SEMA6C-201ENST00000341697 CDH6P55285 790 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms