RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 METTL16Q86W50 562 aaKnown RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF564Q8TBZ8 553 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 MS4A14Q96JA4 679 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 CCDC138Q96M89 665 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 SENP7Q9BQF6 1050 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 TSSK1BQ9BXA7 367 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ECM2O94769 699 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF18P17022 549 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 IRAK1P51617 712 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 FKBP9P1Q75LS8 142 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 TRIM69Q86WT6 500 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 WDR60Q8WVS4 1066 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 PGM2Q96G03 612 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 RXFP1Q9HBX9 757 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 KBTBD4Q9NVX7 518 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 RRN3Q9NYV6 651 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ARHGEF9O43307 516 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 CALB2P22676 271 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 FAM173BQ6P4H8 233 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 THNSL1Q8IYQ7 743 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 HDAC7Q8WUI4 952 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 MIA3Q5JRA6 1907 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 LRRC53A6NM62 1247 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 TRPC5OSA6NMA1 111 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 JADE1Q6IE81 842 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 METTL23Q86XA0 190 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 AADATQ8N5Z0 425 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 PCDHB8Q9UN66 801 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF142P52746 1687 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 H7C0C1 242 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ATP5OP48047 213 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 NR2C2P49116 596 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 SCNN1DP51172 638 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 FAM102BQ5T8I3 360 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 TRIM68Q6AZZ1 485 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 TC2NQ8N9U0 490 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 L1RE1Q9UN81 338 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 POTECB2RU33 542 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 WDR46O15213 610 aaKnown RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 PCYT1AP49585 367 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 PPP4CP60510 307 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 PSMC5P62195 406 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 IFRD2Q12894 506 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 MAPK7Q13164 816 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ARHGEF26Q96DR7 871 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 GREM2Q9H772 168 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ADAMTS1Q9UHI8 967 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 NOVA2Q9UNW9 492 aaKnown RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 SALL1Q9NSC2 1324 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 FDFT1P37268 417 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ACRBPQ8NEB7 543 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 RBM46Q8TBY0 533 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 DEPDC1BQ8WUY9 529 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF560Q96MR9 790 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 PCDHB6Q9Y5E3 794 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 SNX5Q9Y5X3 404 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 MAGEB16A2A368 324 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 H7C0S8 307 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 MAGEB2O15479 319 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 P4HBP07237 508 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ACAT1P24752 427 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 VAMP7P51809 220 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ARHGAP44Q17R89 818 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 MRPL4Q9BYD3 311 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 TLR7Q9NYK1 1049 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 H3BQF6 201 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 CSF1RP07333 972 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ARFIP2P53365 341 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 GSTA3Q16772 222 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 GRAMD4Q6IC98 578 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 NEK10Q6ZWH5 1172 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 KRT27Q7Z3Y8 459 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 TMEM8AQ9HCN3 771 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF839A8K0R7 811 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 NVLO15381 856 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 CDK7P50613 346 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 NEK2P51955 445 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 STX5Q13190 355 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 IGDCC4Q8TDY8 1250 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 GJA10Q969M2 543 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 CYFIP2Q96F07 1278 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 RPF1Q9H9Y2 349 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ANAPC7Q9UJX3 599 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 PLS3P13797 630 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 TMPRSS15P98073 1019 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ANO4Q32M45 955 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 PCNX4Q63HM2 1172 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 ANKRD42Q8N9B4 389 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 CLIC6Q96NY7 704 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 UBE2TQ9NPD8 197 aaPredicted RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 SLC8A2Q9UPR5 921 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 THOC5Q13769 683 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 CYTH1Q15438 398 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms