RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 KLHL2O95198 593 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 LRRC63Q05C16 580 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 NEDD8Q15843 81 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 RHOT2Q8IXI1 618 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 SMG5Q9UPR3 1016 aaKnown RBP11.67□□□□□ -0.54
USP31-201ENST00000219689 TMEM247A6NEH6 219 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 BPIFB4P59827 614 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 MEI1Q5TIA1 1274 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 AHI1Q8N157 1196 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 SMAD5Q99717 465 aaKnown RBP11.67□□□□□ -0.54
USP31-201ENST00000219689 MANSC1Q9H8J5 431 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 SOS2Q07890 1332 aaPredicted RBP11.67□□□□□ -0.54
USP31-201ENST00000219689 IRS4O14654 1257 aaPredicted RBP11.67□□□□□ -0.54
USP31-201ENST00000219689 TRIM24O15164 1050 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 CBX3Q13185 183 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 SHCBP1LQ9BZQ2 653 aa11.67□□□□□ -0.54
USP31-201ENST00000219689 BFSP2Q13515 415 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ATAD3BQ5T9A4 648 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 STX7O15400 261 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 SNX2O60749 519 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 TAF5LO75529 589 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ALOX12P18054 663 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ARSEP51690 589 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 STAT4Q14765 748 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 NR1D2Q14995 579 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 RHPN2Q8IUC4 686 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ITFG2Q969R8 447 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 GJB4Q9NTQ9 266 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 RAPGEF6Q8TEU7 1601 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 E2F8A0AVK6 867 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 CELF4Q9BZC1 486 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 CNBD1Q8NA66 436 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 SPATA5Q8NB90 893 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 MAGEB18Q96M61 343 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 FNDC3AQ9Y2H6 1198 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 ADCY6O43306 1168 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 VIL1P09327 827 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 SLC9A1P19634 815 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ATG14Q6ZNE5 492 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 KRT26Q7Z3Y9 468 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 SLC10A4Q96EP9 437 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 FAM129AQ9BZQ8 928 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 WNT8AQ9H1J5 351 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 EXOSC4Q9NPD3 245 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 ABCF3Q9NUQ8 709 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 STX19Q8N4C7 294 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ABHD8Q96I13 439 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 LIMA1Q9UHB6 759 aaKnown RBP11.66□□□□□ -0.54
USP31-201ENST00000219689 MYO5BQ9ULV0 1848 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 POU5F1BQ06416 359 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 ANGPT2O15123 496 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 PSTPIP1O43586 416 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 NUDT2P50583 147 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 COPAP53621 1224 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 SYCP2LQ5T4T6 812 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 C19orf18Q8NEA5 215 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 CDYLQ9Y232 598 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 MPDZO75970 2070 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 SPTBN2O15020 2390 aa11.66□□□□□ -0.54
USP31-201ENST00000219689 PRPSAP2O60256 369 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 MAPRE2Q15555 327 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 KIAA1755Q5JYT7 1200 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 RUBCNLQ9H714 662 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 SCN3BQ9NY72 215 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 SHROOM3Q8TF72 1996 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 HPS1Q92902 700 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 SELENONQ9NZV5 590 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 MEI4A8MW99 385 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 EFCAB14O75071 495 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 ATP6V1G1O75348 118 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 KLHL18O94889 574 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 MEIS1O00470 390 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 CCNE1P24864 410 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 PABPC4Q13310 644 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP31-201ENST00000219689 COG2Q14746 738 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 CDO1Q16878 200 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 BIVM-ERCC5R4GMW8 1640 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 LDHAP00338 332 aaKnown RBP11.65□□□□□ -0.54
USP31-201ENST00000219689 C4BPBP20851 252 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 GPC5P78333 572 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 OVGP1Q12889 678 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 NDUFA5Q16718 116 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 GIPC3Q8TF64 312 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 TRIM43BA6NCK2 446 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 KLHL41O60662 606 aa11.65□□□□□ -0.54
USP31-201ENST00000219689 GGPS1O95749 300 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms