RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Gm4297D3YWB7 211 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Heatr4E9Q357 955 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Sema4dO09126 861 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ap1b1O35643 943 aaKnown RBP8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 PtprcP06800 1291 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gsta1P13745 223 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 HdcP23738 662 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 RxrgP28705 463 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Rnf10Q3UIW5 804 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gsta1Q6P8Q0 223 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Herc4Q6PAV2 1057 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ppp2r5aQ6PD03 486 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ints2Q80UK8 1198 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Sema3dQ8BH34 777 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Nop53Q8BK35 484 aaKnown RBP8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Arhgap24Q8C4V1 747 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cep57Q8CEE0 500 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Enox2Q8R0Z2 598 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Olfr449Q8VGW8 311 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 CrebzfQ91ZR3 358 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Mrps22Q9CXW2 359 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Lman1Q9D0F3 517 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tbx18Q9EPZ6 613 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Krt17Q9QWL7 433 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tex21Q9R0U9 575 aa8.1□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Frmpd4A2AFR3 1320 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm36210A0A1B0GS00 229 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cfap221A9Q751 836 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm8994E9PV04 411 aaKnown RBP8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Srsf11E9Q6E5 511 aaKnown RBP8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Hmgxb3G3X9M3 1254 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 AlplP09242 524 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 LynP25911 512 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Klf1P46099 358 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Siah1aP61092 282 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cdk16Q04735 496 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Agxt2Q3UEG6 513 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Miga1Q4QQM5 600 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ubxn7Q6P5G6 467 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ssxb5Q6XAS2 159 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Uba5Q8VE47 403 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Lmcd1Q8VEE1 365 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 CbsQ91WT9 561 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Chst12Q99LL3 419 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dnajc18Q9CZJ9 357 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dlc1Q9R0Z9 1092 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Btbd35f16A0A087WSN2 498 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm44G3UW88 330 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cd151O35566 253 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Pax3P24610 479 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cog7Q3UM29 770 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tmtc2Q56A06 836 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Rasa3Q60790 834 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Nme8Q715T0 586 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 HlfQ8BW74 295 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 CenpuQ8C4M7 410 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Lmbrd1Q8K0B2 537 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 TkfcQ8VC30 578 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Basp1Q91XV3 226 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Sytl1Q99N80 567 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 AenQ9CZI9 336 aaKnown RBP8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ppp2r3cQ9JK24 453 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 NbnQ9R207 751 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Syngap1F6SEU4 1340 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Skor2A7M7C7 1008 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gsta3P30115 221 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Smyd1P97443 490 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Col6a1Q04857 1025 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 PcQ05920 1178 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Zscan26Q5RJ54 466 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ugt1a9Q62452 528 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dlg1Q811D0 905 aaKnown RBP8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Fam118bQ8C569 351 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gimap6Q8K349 305 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Pdk3Q922H2 415 aaKnown RBP8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tex13bQ99MW5 186 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Llcfc1Q9D9P8 108 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Sfmbt1Q9JMD1 863 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Angptl2Q9R045 493 aa8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 VarsQ9Z1Q9 1263 aaKnown RBP8.09□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Simc1E9Q6E9 1354 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Rgs2O08849 211 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Syt2P46097 422 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Il1rapl1P59823 695 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 PrkacbP68181 351 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ncoa4Q5U4H9 625 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ctnna2Q61301 953 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Arhgef18Q6P9R4 1021 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ppp1r12bQ8BG95 976 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Mageb18Q8BQR7 327 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Bmt2Q8BXK4 403 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Prmt3Q922H1 532 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Rab11fip1Q9D620 645 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Sept6Q9R1T4 434 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Adam23Q9R1V7 829 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 FAM186AQ9D9R9 1790 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Olfr1145A2AVC7 325 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ifit3bE9PV48 403 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ccdc175E9PVB3 822 aa8.08□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Lmnb1P14733 588 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms