RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W CSM4Q08955 156 aa1.41□□□□□ -2.18
SKI3YPR189W VIK1Q12045 647 aa1.41□□□□□ -2.18
SKI3YPR189W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
SKI3YPR189W WTM1Q12363 437 aaKnown RBP1.41□□□□□ -2.18
SKI3YPR189W QCR7P00128 127 aa1.4□□□□□ -2.18
SKI3YPR189W POF1P25576 258 aa1.4□□□□□ -2.18
SKI3YPR189W RFA3P26755 122 aaKnown RBP1.4□□□□□ -2.18
SKI3YPR189W INO2P26798 304 aa1.4□□□□□ -2.18
SKI3YPR189W UBC6P33296 250 aaPredicted RBP1.4□□□□□ -2.18
SKI3YPR189W YIL001WP40560 513 aa1.4□□□□□ -2.18
SKI3YPR189W IDP2P41939 412 aa1.4□□□□□ -2.18
SKI3YPR189W RRT5P43607 289 aa1.4□□□□□ -2.18
SKI3YPR189W NIF3P53081 288 aa1.4□□□□□ -2.18
SKI3YPR189W YGR067CP53243 804 aa1.4□□□□□ -2.18
SKI3YPR189W YET2Q04210 160 aa1.4□□□□□ -2.18
SKI3YPR189W OSW1Q08692 278 aa1.4□□□□□ -2.18
SKI3YPR189W DDC1Q08949 612 aa1.4□□□□□ -2.18
SKI3YPR189W RPN6Q12377 434 aa1.4□□□□□ -2.18
SKI3YPR189W YDR524C-BQ3E6R4 66 aa1.4□□□□□ -2.18
SKI3YPR189W RIF1P29539 1916 aa1.4□□□□□ -2.18
SKI3YPR189W HTB1P02293 131 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W HTB2P02294 131 aa1.4□□□□□ -2.19
SKI3YPR189W PIS1P06197 220 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W YAK1P14680 807 aa1.4□□□□□ -2.19
SKI3YPR189W MEI4P29467 408 aa1.4□□□□□ -2.19
SKI3YPR189W NDC1P32500 655 aa1.4□□□□□ -2.19
SKI3YPR189W RPL10P41805 221 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W PSA1P41940 361 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W MRM2P53123 320 aa1.4□□□□□ -2.19
SKI3YPR189W LSG1P53145 640 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W MST27P53176 234 aa1.4□□□□□ -2.19
SKI3YPR189W SWC4P53201 476 aa1.4□□□□□ -2.19
SKI3YPR189W GLT1Q12680 2145 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W RPO41P13433 1351 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W REP1P03871 373 aa1.4□□□□□ -2.19
SKI3YPR189W RNA15P25299 296 aaPredicted RBP1.4□□□□□ -2.19
SKI3YPR189W YCR022CP25620 114 aa1.4□□□□□ -2.19
SKI3YPR189W SIP2P34164 415 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W PMU1P36069 295 aa1.4□□□□□ -2.19
SKI3YPR189W YBR241CP38142 488 aa1.4□□□□□ -2.19
SKI3YPR189W BMT2P38278 337 aa1.4□□□□□ -2.19
SKI3YPR189W YPC1P38298 316 aa1.4□□□□□ -2.19
SKI3YPR189W BAT1P38891 393 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W MST28P39552 234 aa1.4□□□□□ -2.19
SKI3YPR189W YAT2P40017 923 aa1.4□□□□□ -2.19
SKI3YPR189W RSM25P40496 264 aa1.4□□□□□ -2.19
SKI3YPR189W IRC24P40580 263 aa1.4□□□□□ -2.19
SKI3YPR189W OST1P41543 476 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W GUF1P46943 645 aa1.4□□□□□ -2.19
SKI3YPR189W CDH1P53197 566 aa1.4□□□□□ -2.19
SKI3YPR189W NRM1P53718 249 aa1.4□□□□□ -2.19
SKI3YPR189W SNX41Q04053 625 aa1.4□□□□□ -2.19
SKI3YPR189W YLR012CQ07927 99 aa1.4□□□□□ -2.19
SKI3YPR189W YDL109CQ12103 647 aa1.4□□□□□ -2.19
SKI3YPR189W PER33Q12144 273 aa1.4□□□□□ -2.19
SKI3YPR189W MDM35O60200 86 aa1.4□□□□□ -2.19
SKI3YPR189W RPL20AP0CX23 172 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W RPL20BP0CX24 172 aaPredicted RBP1.4□□□□□ -2.19
SKI3YPR189W YCR102CP25608 368 aa1.4□□□□□ -2.19
SKI3YPR189W CPR3P25719 182 aa1.4□□□□□ -2.19
SKI3YPR189W RPL16AP26784 199 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W PRS3P38689 320 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W HAT2P39984 401 aa1.4□□□□□ -2.19
SKI3YPR189W HAC1P41546 238 aa1.4□□□□□ -2.19
SKI3YPR189W TES1P41903 349 aaKnown RBP1.4□□□□□ -2.19
SKI3YPR189W YJR079WP47126 109 aa1.4□□□□□ -2.19
SKI3YPR189W MTM1P53320 366 aa1.4□□□□□ -2.19
SKI3YPR189W YIP3P53633 176 aa1.4□□□□□ -2.19
SKI3YPR189W WSC2P53832 503 aa1.4□□□□□ -2.19
SKI3YPR189W YNL040WP53960 456 aaPredicted RBP1.4□□□□□ -2.19
SKI3YPR189W ASI3P53983 676 aa1.4□□□□□ -2.19
SKI3YPR189W PLB3Q08108 686 aa1.4□□□□□ -2.19
SKI3YPR189W YPR064WQ12492 139 aa1.4□□□□□ -2.19
SKI3YPR189W SNF6P18888 332 aa1.39□□□□□ -2.19
SKI3YPR189W EHD3P28817 500 aa1.39□□□□□ -2.19
SKI3YPR189W IDH1P28834 360 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SKI3YPR189W QRI5P32344 111 aa1.39□□□□□ -2.19
SKI3YPR189W PHA2P32452 334 aa1.39□□□□□ -2.19
SKI3YPR189W SPO23P33757 523 aa1.39□□□□□ -2.19
SKI3YPR189W AST1P35183 429 aa1.39□□□□□ -2.19
SKI3YPR189W MCH2P36032 473 aa1.39□□□□□ -2.19
SKI3YPR189W YBR137WP38276 179 aa1.39□□□□□ -2.19
SKI3YPR189W WSC4P38739 605 aa1.39□□□□□ -2.19
SKI3YPR189W IKI1P38874 309 aa1.39□□□□□ -2.19
SKI3YPR189W YFR057WP43625 151 aa1.39□□□□□ -2.19
SKI3YPR189W YPT32P51996 222 aaKnown RBP1.39□□□□□ -2.19
SKI3YPR189W GET1P53192 235 aa1.39□□□□□ -2.19
SKI3YPR189W MAL13P53338 473 aa1.39□□□□□ -2.19
SKI3YPR189W YNL095CP53932 642 aa1.39□□□□□ -2.19
SKI3YPR189W TAZ1Q06510 381 aa1.39□□□□□ -2.19
SKI3YPR189W GPM2Q12008 311 aa1.39□□□□□ -2.19
SKI3YPR189W TFS1P14306 219 aa1.39□□□□□ -2.19
SKI3YPR189W LDB16P25587 256 aa1.39□□□□□ -2.19
SKI3YPR189W ILV6P25605 309 aaKnown RBP1.39□□□□□ -2.19
SKI3YPR189W HOM6P31116 359 aaKnown RBP1.39□□□□□ -2.19
SKI3YPR189W SSO1P32867 290 aa1.39□□□□□ -2.19
SKI3YPR189W VPS51P36116 164 aa1.39□□□□□ -2.19
SKI3YPR189W TRM5P38793 499 aa1.39□□□□□ -2.19
SKI3YPR189W SUR2P38992 349 aa1.39□□□□□ -2.19
SKI3YPR189W YER121WP40076 114 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms