RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	LRO1	P40345	661 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	YIL024C	P40543	189 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	TYW3	P53177	273 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	INP1	Q03694	420 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	VBA4	Q04602	768 aa	Known RBP	6.24	□□□□□ -1.41
SNT309	YPR101W	DCS1	Q06151	350 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	GRC3	Q07845	632 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	GUP2	Q08929	609 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	MMP1	Q12372	583 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	VMA9	Q3E7B6	73 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	TFB5	Q3E7C1	72 aa	Predicted RBP	6.24	□□□□□ -1.41
SNT309	YPR101W	VPS13	Q07878	3144 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	SSA3	P09435	649 aa	Known RBP	6.23	□□□□□ -1.41
SNT309	YPR101W	SAC7	P17121	654 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	CPR4	P25334	318 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	DBF20	P32328	564 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	MSN4	P33749	630 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	MRPL27	P36526	146 aa	Predicted RBP	6.23	□□□□□ -1.41
SNT309	YPR101W	OCA5	P38738	679 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	IKI1	P38874	309 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
SNT309	YPR101W	LYS1	P38998	373 aa	RIP-Chip data	6.23	□□□□□ -1.41	not detected
SNT309	YPR101W	PUG1	P40100	303 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	AVT7	P40501	490 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	YIL060W	P40519	144 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	OTU1	P43558	301 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	CIN2	P46670	268 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	MTM1	P53320	366 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	MPP6	P53725	186 aa	Predicted RBP	6.23	□□□□□ -1.41
SNT309	YPR101W	AVO1	Q08236	1176 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	ZEO1	Q08245	113 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	ORT1	Q12375	292 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	TFC7	Q12415	435 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	SET6	Q12529	373 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	PCC1	Q3E833	88 aa		6.23	□□□□□ -1.41
SNT309	YPR101W	FUR4	P05316	633 aa	Known RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	ZRC1	P20107	442 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	TRR1	P29509	319 aa	Known RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	RPD3	P32561	433 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	SPT10	P35208	640 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	YKL162C	P36052	402 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	PAN3	P36102	679 aa	Predicted RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	SDH8	P38345	138 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	GPI14	P47088	403 aa	Known RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	YJR111C	P47148	283 aa	Known RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	MCM22	P47167	239 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	SCW4	P53334	386 aa	Known RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	ERV25	P54837	211 aa	Known RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	SNX41	Q04053	625 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	MRPL1	Q04599	285 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	MRX8	Q05473	314 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	COQ10	Q08058	207 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	RTK1	Q12100	620 aa	Predicted RBP	6.22	□□□□□ -1.41
SNT309	YPR101W	ODC2	Q99297	307 aa		6.22	□□□□□ -1.41
SNT309	YPR101W	RPS14A	P06367	137 aa	Known RBP	6.21	□□□□□ -1.42
SNT309	YPR101W	ARO3	P14843	370 aa	Known RBP	6.21	□□□□□ -1.42
SNT309	YPR101W	URA6	P15700	204 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	PPH21	P23594	369 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	SLC1	P33333	303 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
SNT309	YPR101W	LNP1	P38878	278 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	RPS14B	P39516	138 aa	Known RBP	6.21	□□□□□ -1.42
SNT309	YPR101W	VPS52	P39904	641 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	BUL1	P48524	976 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	NIF3	P53081	288 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	YGR012W	P53206	393 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	YLR152C	P54072	576 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	NCE101	Q02820	53 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	NPC2	Q12408	173 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	HBN1	Q96VH4	193 aa		6.21	□□□□□ -1.42
SNT309	YPR101W	RPS31	P05759	152 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	HIS5	P07172	385 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	UBI4	P0CG63	381 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	RPL40A	P0CH08	128 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	RPL40B	P0CH09	128 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	RPL20A	P0CX23	172 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	RPL20B	P0CX24	172 aa	Predicted RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	FUS1	P11710	512 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	GAS1	P22146	559 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	ERG4	P25340	473 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	DCG1	P32460	244 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	FMT1	P32785	401 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	VAM7	P32912	316 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	SNC2	P33328	115 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	PPZ2	P33329	710 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	MKS1	P34072	584 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	SRP102	P36057	244 aa	Predicted RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	PGD1	P40356	397 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	POG1	P40473	351 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	YIL108W	P40483	696 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	MRX5	P47007	382 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	BXI1	P48558	297 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	OKP1	P53298	406 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	FMP41	P53889	259 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	ACT1	P60010	375 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	BUD25	P85052	153 aa		6.2	□□□□□ -1.42
SNT309	YPR101W	EGD1	Q02642	157 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	HNT1	Q04344	158 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	SDO1	Q07953	250 aa	Known RBP	6.2	□□□□□ -1.42
SNT309	YPR101W	HRT1	Q08273	121 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms