RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	JHD2	P47156	728 aa	Predicted RBP	3.63	□□□□□ -1.83
CMR3	YPR013C	YGL260W	P53056	76 aa		3.63	□□□□□ -1.83
CMR3	YPR013C	SNZ1	Q03148	297 aa		3.63	□□□□□ -1.83
CMR3	YPR013C	DIB1	Q06819	143 aa	Predicted RBP	3.63	□□□□□ -1.83
CMR3	YPR013C	YPL119C-A	Q3E751	87 aa		3.63	□□□□□ -1.83
CMR3	YPR013C	PHO2	P07269	559 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	OM14	P38325	134 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	CUE1	P38428	203 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	NBP35	P52920	328 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	BOR1	P53838	576 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	SWS2	P53937	143 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	YDR115W	Q04598	105 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	YRA1	Q12159	226 aa	Known RBP	3.62	□□□□□ -1.83
CMR3	YPR013C	YKL183C-A	Q3E765	70 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	AI5_BETA	Q9ZZX0	354 aa		3.62	□□□□□ -1.83
CMR3	YPR013C	OSM1	P21375	501 aa	Known RBP	3.61	□□□□□ -1.83
CMR3	YPR013C	SHE3	P38272	425 aa	Known RBP	3.61	□□□□□ -1.83
CMR3	YPR013C	MBA1	P38300	278 aa		3.61	□□□□□ -1.83
CMR3	YPR013C	URA8	P38627	578 aa	Predicted RBP	3.61	□□□□□ -1.83
CMR3	YPR013C	SER33	P40510	469 aa		3.61	□□□□□ -1.83
CMR3	YPR013C	RRS1	Q08746	203 aa	Known RBP	3.61	□□□□□ -1.83
CMR3	YPR013C	YOR376W	Q08900	122 aa		3.61	□□□□□ -1.83
CMR3	YPR013C	MMT2	Q08970	484 aa		3.61	□□□□□ -1.83
CMR3	YPR013C	YMR316C-A	I2HB70	103 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	MATALPHA2	P0CY08	210 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	HMLALPHA2	P0CY09	210 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	RPL4A	P10664	362 aa	Known RBP	3.6	□□□□□ -1.83
CMR3	YPR013C	YCR102C	P25608	368 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	FZO1	P38297	855 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	YNL194C	P40169	301 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	PRE6	P40303	254 aa	Known RBP	3.6	□□□□□ -1.83
CMR3	YPR013C	UTP18	P40362	594 aa	Predicted RBP	3.6	□□□□□ -1.83
CMR3	YPR013C	IGD1	P43598	195 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	RPL4B	P49626	362 aa	Known RBP	3.6	□□□□□ -1.83
CMR3	YPR013C	RMI1	Q02685	241 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	MRX11	Q03079	207 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	LIP2	Q06005	328 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	YPR098C	Q06089	161 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	YPL278C	Q08990	100 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	YMR230W-A	Q3E7B5	62 aa		3.6	□□□□□ -1.83
CMR3	YPR013C	TPI1	P00942	248 aa	Known RBP	3.59	□□□□□ -1.83
CMR3	YPR013C	RPL27A	P0C2H6	136 aa	Known RBP	3.59	□□□□□ -1.83
CMR3	YPR013C	RPL27B	P0C2H7	136 aa	Known RBP	3.59	□□□□□ -1.83
CMR3	YPR013C	CBF1	P17106	351 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	SSO1	P32867	290 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	FRM2	P37261	193 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	RFT1	P38206	574 aa	Predicted RBP	3.59	□□□□□ -1.83
CMR3	YPR013C	KRE29	P40026	464 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	CWC23	P52868	283 aa	Predicted RBP	3.59	□□□□□ -1.83
CMR3	YPR013C	ATG17	Q06410	417 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	PLB3	Q08108	686 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	SRO7	Q12038	1033 aa		3.59	□□□□□ -1.83
CMR3	YPR013C	ATG15	P25641	520 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	CAM1	P29547	415 aa	Known RBP	3.58	□□□□□ -1.84
CMR3	YPR013C	MRPL3	P36516	390 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	YBR096W	P38256	230 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	MED8	P38304	223 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	GGC1	P38988	300 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	SEN34	P39707	275 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	AVT7	P40501	490 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	GAB1	P41733	394 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	YFL064C	P43540	174 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	MIC26	P50087	233 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	LIF1	P53150	421 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	FMP48	P53233	369 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	RHO3	Q00245	231 aa	Known RBP	3.58	□□□□□ -1.84
CMR3	YPR013C	CTF19	Q02732	369 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	RPL21A	Q02753	160 aa	Known RBP	3.58	□□□□□ -1.84
CMR3	YPR013C	SDC1	Q03323	175 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	LOA1	Q06508	300 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	RFM1	Q12192	310 aa		3.58	□□□□□ -1.84
CMR3	YPR013C	ASP3-2	P0CX77	362 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	ASP3-3	P0CX78	362 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	ASP3-4	P0CX79	362 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	ASP3-1	P0CZ17	362 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	CDC10	P25342	322 aa	Known RBP	3.57	□□□□□ -1.84
CMR3	YPR013C	IMP1	P28627	190 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	EHD3	P28817	500 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
CMR3	YPR013C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	RIP-Chip
CMR3	YPR013C	YMR166C	Q03829	368 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	CDC123	Q05791	360 aa		3.57	□□□□□ -1.84
CMR3	YPR013C	ARC18	Q05933	178 aa	Known RBP	3.57	□□□□□ -1.84
CMR3	YPR013C	RRG7	Q08774	242 aa	Predicted RBP	3.57	□□□□□ -1.84
CMR3	YPR013C	RAD9	P14737	1309 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	HTB1	P02293	131 aa	Known RBP	3.56	□□□□□ -1.84
CMR3	YPR013C	HTB2	P02294	131 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	APA2	P22108	325 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	VPH2	P32341	215 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	ARC19	P33204	171 aa	Known RBP	3.56	□□□□□ -1.84
CMR3	YPR013C	SGE1	P33335	543 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	TIP20	P33891	701 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	YKL075C	P36083	450 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	GOS1	P38736	223 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	YPI1	P43587	155 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	PRP24	P49960	444 aa	Known RBP	3.56	□□□□□ -1.84
CMR3	YPR013C	YPL113C	Q02961	396 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	PEX10	Q05568	337 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	COQ10	Q08058	207 aa		3.56	□□□□□ -1.84
CMR3	YPR013C	ABP140	Q08641	628 aa	Known RBP	3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms