RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YDR387CQ04162 555 aa6.19□□□□□ -1.42
UME1YPL139C RSA3Q05942 220 aaKnown RBP6.19□□□□□ -1.42
UME1YPL139C MLC2Q06580 163 aa6.19□□□□□ -1.42
UME1YPL139C PML1Q07930 204 aaPredicted RBP6.19□□□□□ -1.42
UME1YPL139C YDR215CQ12240 137 aa6.19□□□□□ -1.42
UME1YPL139C RPL35AP0CX84 120 aaKnown RBP6.18□□□□□ -1.42
UME1YPL139C RPL35BP0CX85 120 aaKnown RBP6.18□□□□□ -1.42
UME1YPL139C DBF2P22204 572 aa6.18□□□□□ -1.42
UME1YPL139C PUP2P32379 260 aa6.18□□□□□ -1.42
UME1YPL139C DUT1P33317 147 aa6.18□□□□□ -1.42
UME1YPL139C APL3P38065 1025 aa6.18□□□□□ -1.42
UME1YPL139C VBA2P38358 474 aaKnown RBP6.18□□□□□ -1.42
UME1YPL139C BFR1P38934 470 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42 RIP-Chip
UME1YPL139C FLX1P40464 311 aa6.18□□□□□ -1.42
UME1YPL139C HIS6P40545 261 aa6.18□□□□□ -1.42
UME1YPL139C PPT1P53043 513 aa6.18□□□□□ -1.42
UME1YPL139C CIK1Q01649 594 aa6.18□□□□□ -1.42
UME1YPL139C AIM36Q03798 255 aa6.18□□□□□ -1.42
UME1YPL139C SYC1Q08553 188 aaPredicted RBP6.18□□□□□ -1.42
UME1YPL139C PST2Q12335 198 aaKnown RBP6.18□□□□□ -1.42
UME1YPL139C HNM1P19807 563 aa6.18□□□□□ -1.42
UME1YPL139C PHO80P20052 293 aa6.18□□□□□ -1.42
UME1YPL139C DIT1P21623 536 aa6.18□□□□□ -1.42
UME1YPL139C RPL5P26321 297 aaKnown RBP6.18□□□□□ -1.42
UME1YPL139C RPC34P32910 317 aa6.18□□□□□ -1.42
UME1YPL139C YKL107WP34251 309 aa6.18□□□□□ -1.42
UME1YPL139C SHM2P37291 469 aaKnown RBP6.18□□□□□ -1.42
UME1YPL139C PHO90P39535 881 aa6.18□□□□□ -1.42
UME1YPL139C YER184CP39961 794 aa6.18□□□□□ -1.42
UME1YPL139C RET2P43621 546 aa6.18□□□□□ -1.42
UME1YPL139C VOA1P53262 265 aa6.18□□□□□ -1.42
UME1YPL139C BRE4Q07660 1125 aa6.18□□□□□ -1.42
UME1YPL139C YLR040CQ07988 224 aa6.18□□□□□ -1.42
UME1YPL139C RKM1Q08961 583 aaPredicted RBP6.18□□□□□ -1.42
UME1YPL139C URA2P07259 2214 aaKnown RBP6.17□□□□□ -1.42
UME1YPL139C STF1P01098 86 aa6.17□□□□□ -1.42
UME1YPL139C FPS1P23900 669 aa6.17□□□□□ -1.42
UME1YPL139C MEK1P24719 497 aaPredicted RBP6.17□□□□□ -1.42
UME1YPL139C SRP102P36057 244 aaPredicted RBP6.17□□□□□ -1.42
UME1YPL139C TAT1P38085 619 aa6.17□□□□□ -1.42
UME1YPL139C SOP4P39543 234 aaPredicted RBP6.17□□□□□ -1.42
UME1YPL139C AIM10P39965 576 aaKnown RBP6.17□□□□□ -1.42
UME1YPL139C GPP2P40106 250 aaKnown RBP6.17□□□□□ -1.42
UME1YPL139C SLZ1P40167 298 aa6.17□□□□□ -1.42
UME1YPL139C OST1P41543 476 aaKnown RBP6.17□□□□□ -1.42
UME1YPL139C PAM16P42949 149 aa6.17□□□□□ -1.42
UME1YPL139C YPQ2Q06328 317 aa6.17□□□□□ -1.42
UME1YPL139C ACF2Q12168 779 aa6.17□□□□□ -1.42
UME1YPL139C YGK3Q12222 375 aaPredicted RBP6.17□□□□□ -1.42
UME1YPL139C SCM3Q12334 223 aa6.17□□□□□ -1.42
UME1YPL139C RPS23AP0CX29 145 aaKnown RBP6.16□□□□□ -1.42
UME1YPL139C RPS23BP0CX30 145 aa6.16□□□□□ -1.42
UME1YPL139C FUN19P28003 413 aaPredicted RBP6.16□□□□□ -1.42
UME1YPL139C YME2P32843 850 aa6.16□□□□□ -1.42
UME1YPL139C IPT1P38954 527 aa6.16□□□□□ -1.42
UME1YPL139C RTT105P40063 208 aa6.16□□□□□ -1.42
UME1YPL139C GLR1P41921 483 aaKnown RBP6.16□□□□□ -1.42
UME1YPL139C CIN2P46670 268 aa6.16□□□□□ -1.42
UME1YPL139C COS10P52924 374 aa6.16□□□□□ -1.42
UME1YPL139C BUD17P53727 317 aa6.16□□□□□ -1.42
UME1YPL139C YDR391CQ04170 232 aa6.16□□□□□ -1.42
UME1YPL139C MRX8Q05473 314 aa6.16□□□□□ -1.42
UME1YPL139C AIM6Q07716 390 aa6.16□□□□□ -1.42
UME1YPL139C GSH2Q08220 491 aa6.16□□□□□ -1.42
UME1YPL139C SRL2Q12020 392 aa6.16□□□□□ -1.42
UME1YPL139C GEP5Q12393 293 aa6.16□□□□□ -1.42
UME1YPL139C MES1P00958 751 aaKnown RBP6.15□□□□□ -1.43
UME1YPL139C MSW1P04803 379 aa6.15□□□□□ -1.43
UME1YPL139C DSF1P0CX08 502 aa6.15□□□□□ -1.43
UME1YPL139C YNR073CP0CX09 502 aa6.15□□□□□ -1.43
UME1YPL139C PRP21P32524 280 aaPredicted RBP6.15□□□□□ -1.43
UME1YPL139C MNS1P32906 549 aa6.15□□□□□ -1.43
UME1YPL139C RIB7P33312 244 aa6.15□□□□□ -1.43
UME1YPL139C SHE1P38200 338 aa6.15□□□□□ -1.43
UME1YPL139C EGD2P38879 174 aaKnown RBP6.15□□□□□ -1.43
UME1YPL139C AIM20P40451 204 aa6.15□□□□□ -1.43
UME1YPL139C NCA3P46955 337 aa6.15□□□□□ -1.43
UME1YPL139C CTK2P46962 323 aa6.15□□□□□ -1.43
UME1YPL139C YJL055WP47044 245 aa6.15□□□□□ -1.43
UME1YPL139C LOH1P47055 219 aa6.15□□□□□ -1.43
UME1YPL139C ILM1P47155 203 aa6.15□□□□□ -1.43
UME1YPL139C MSS11Q03825 758 aa6.15□□□□□ -1.43
UME1YPL139C YMR087WQ04299 284 aa6.15□□□□□ -1.43
UME1YPL139C RBS1Q05672 457 aaKnown RBP6.15□□□□□ -1.43
UME1YPL139C NNT1Q05874 261 aa6.15□□□□□ -1.43
UME1YPL139C TPO3Q06451 622 aa6.15□□□□□ -1.43
UME1YPL139C YLR108CQ12259 485 aa6.15□□□□□ -1.43
UME1YPL139C TAF3Q12297 353 aa6.15□□□□□ -1.43
UME1YPL139C RTR2Q12378 196 aa6.15□□□□□ -1.43
UME1YPL139C RPL39P04650 51 aa6.14□□□□□ -1.43
UME1YPL139C BAP2P38084 609 aa6.14□□□□□ -1.43
UME1YPL139C CTR2P38865 189 aa6.14□□□□□ -1.43
UME1YPL139C TIR3P40552 269 aa6.14□□□□□ -1.43
UME1YPL139C YIR020CP40575 100 aa6.14□□□□□ -1.43
UME1YPL139C PHB2P50085 310 aa6.14□□□□□ -1.43
UME1YPL139C YDR114CQ04597 100 aa6.14□□□□□ -1.43
UME1YPL139C YLR173WQ06247 608 aa6.14□□□□□ -1.43
UME1YPL139C RRS1Q08746 203 aaKnown RBP6.14□□□□□ -1.43
UME1YPL139C RDL1Q12305 139 aaKnown RBP6.14□□□□□ -1.43
UME1YPL139C PCL9Q12477 304 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms