RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	UPS2	P35200	230 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	TOS1	P38288	455 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	SRP68	P38687	599 aa	Known RBP	6.26	□□□□□ -1.41
VTS1	YOR359W	SNU13	P39990	126 aa	Known RBP	6.26	□□□□□ -1.41
VTS1	YOR359W	PRE6	P40303	254 aa	Known RBP	6.26	□□□□□ -1.41
VTS1	YOR359W	TAH11	P47112	604 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	GTR2	P53290	341 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	FIT1	Q04433	528 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	ADH6	Q04894	360 aa	Known RBP	6.26	□□□□□ -1.41
VTS1	YOR359W	NUT2	Q06213	157 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	MRPL35	Q06678	367 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	NUS1	Q12063	375 aa		6.26	□□□□□ -1.41
VTS1	YOR359W	ADE4	P04046	510 aa	Known RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	PHO2	P07269	559 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	RPS4A	P0CX35	261 aa	Known RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	RPS4B	P0CX36	261 aa	Known RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	SST2	P11972	698 aa	Known RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	ADH7	P25377	361 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	PBN1	P25580	416 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	SYN8	P31377	255 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	YKL151C	P36059	337 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	PMU1	P36069	295 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	MTC4	P38335	694 aa	Known RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	ASP1	P38986	381 aa	Predicted RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	YER085C	P40058	173 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	YIL152W	P40455	235 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	IME4	P41833	600 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	YFL052W	P43551	465 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	ALY2	P47029	1046 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	SAM37	P50110	327 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	BOR1	P53838	576 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	RHO4	Q00246	291 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	GIP3	Q03016	1276 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	FSF1	Q12029	327 aa	Known RBP	6.25	□□□□□ -1.41
VTS1	YOR359W	RKI1	Q12189	258 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	TRM13	Q12383	476 aa		6.25	□□□□□ -1.41
VTS1	YOR359W	RPB5	P20434	215 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	SRB5	P32585	307 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	BCS1	P32839	456 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	RIB1	P38066	345 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	CUE1	P38428	203 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	COX15	P40086	486 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	YJL163C	P46996	555 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	EXG2	P52911	562 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	YNR021W	P53723	404 aa	Known RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	MPP6	P53725	186 aa	Predicted RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	YNL260C	P53846	198 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	ACT1	P60010	375 aa	Known RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	RSM23	Q01163	450 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	YVH1	Q02256	364 aa	Known RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	OAZ1	Q02803	292 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	DAL4	Q04895	635 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	ERP1	Q05359	219 aa	Known RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	YLR413W	Q06689	675 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	CSI2	Q08054	341 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	FRE6	Q12473	712 aa		6.24	□□□□□ -1.41
VTS1	YOR359W	TIF6	Q12522	245 aa	Known RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	FOL3	Q12676	427 aa	Predicted RBP	6.24	□□□□□ -1.41
VTS1	YOR359W	MSW1	P04803	379 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	TIR1	P10863	254 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	URA10	P30402	227 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	AAR2	P32357	355 aa	Predicted RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	SFK1	P35735	353 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YBR063C	P38083	404 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	RTC2	P38279	296 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	FIR1	P40020	876 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YER121W	P40076	114 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	NAS2	P40555	220 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	MIC26	P50087	233 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YAP1802	P53309	568 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	SAY1	P53324	424 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	ATG4	P53867	494 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	NUP100	Q02629	959 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	PLB2	Q03674	706 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	GIS1	Q03833	894 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	HRD3	Q05787	833 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YDL057W	Q07379	328 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	HEM25	Q07534	307 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YTM1	Q12024	460 aa	Predicted RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	PRR2	Q12310	699 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	PAR32	Q12515	295 aa	Known RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	RPL13A	Q12690	199 aa	Predicted RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	YCR075W-A	Q3E830	75 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	UBR2	Q07963	1872 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YEL009C-A	A0A023PZF2	135 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	YML003W	P0CF16	290 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	ANB1	P19211	157 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	RIM1	P32445	135 aa	Known RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	CDC5	P32562	705 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	TIP20	P33891	701 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	WSC4	P38739	605 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	GDI1	P39958	451 aa	Known RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	PUG1	P40100	303 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	GPP1	P41277	250 aa	Known RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	ALK1	P43633	760 aa	Known RBP	6.23	□□□□□ -1.41
VTS1	YOR359W	ASI3	P53983	676 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	AVO2	Q04749	426 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	PAU23	Q07987	124 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	NAT5	Q08689	176 aa		6.23	□□□□□ -1.41
VTS1	YOR359W	FRE8	Q12209	686 aa		6.23	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms