RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	ZRT3	P34240	503 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	MRP21	P38175	177 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	KRE29	P40026	464 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	RRG9	P40156	214 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	ASI3	P53983	676 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	KRE28	Q04431	385 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	MHR1	Q06630	226 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	ADF1	Q2V2Q1	113 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	YPL119C-A	Q3E751	87 aa		2.94	□□□□□ -1.94
CAF20	YOR276W	CDC36	P06100	191 aa	Predicted RBP	2.93	□□□□□ -1.94
CAF20	YOR276W	ALK2	P32789	676 aa	Predicted RBP	2.93	□□□□□ -1.94
CAF20	YOR276W	JEN1	P36035	616 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	AIM29	P36154	155 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	MRPL3	P36516	390 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
CAF20	YOR276W	PRE5	P40302	234 aa	Known RBP	2.93	□□□□□ -1.94
CAF20	YOR276W	DSN1	P40568	576 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	HOC1	P47124	396 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	JHD2	P47156	728 aa	Predicted RBP	2.93	□□□□□ -1.94
CAF20	YOR276W	PRP24	P49960	444 aa	Known RBP	2.93	□□□□□ -1.94
CAF20	YOR276W	NBP35	P52920	328 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	HAL1	Q01766	294 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	MRS2	Q01926	470 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	CTF19	Q02732	369 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	GTO3	Q04806	366 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	MCH1	Q07376	486 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	CSM4	Q08955	156 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	TRM10	Q12400	293 aa		2.93	□□□□□ -1.94
CAF20	YOR276W	HOM6	P31116	359 aa	Known RBP	2.92	□□□□□ -1.94
CAF20	YOR276W	TPS2	P31688	896 aa	Known RBP	2.92	□□□□□ -1.94
CAF20	YOR276W	UTH1	P36135	365 aa		2.92	□□□□□ -1.94
CAF20	YOR276W	ECM34	P38728	170 aa		2.92	□□□□□ -1.94
CAF20	YOR276W	YFL064C	P43540	174 aa		2.92	□□□□□ -1.94
CAF20	YOR276W	HSH155	P49955	971 aa	Known RBP	2.92	□□□□□ -1.94
CAF20	YOR276W	USE1	P53146	245 aa		2.92	□□□□□ -1.94
CAF20	YOR276W	YLR152C	P54072	576 aa		2.92	□□□□□ -1.94
CAF20	YOR276W	ARC18	Q05933	178 aa	Known RBP	2.92	□□□□□ -1.94
CAF20	YOR276W	YAL063C-A	Q3E791	96 aa		2.92	□□□□□ -1.94
CAF20	YOR276W	CHD1	P32657	1468 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	PSK1	P31374	1356 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	RPL4A	P10664	362 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	NHP6B	P11633	99 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	RPO26	P20435	155 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	RPL24B	P24000	155 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	CAM1	P29547	415 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	MED8	P38304	223 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	MIC12	P38341	106 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	SIP3	P38717	1229 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	THO1	P40040	218 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	YJR079W	P47126	109 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	RPL4B	P49626	362 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	YGL118C	P53132	145 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	YGR018C	P53211	109 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	ZRG17	P53735	605 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	FMP41	P53889	259 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	SDC1	Q03323	175 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	ECM19	Q06011	112 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	SPO77	Q06134	477 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	PLB3	Q08108	686 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	DFM1	Q12743	341 aa	Known RBP	2.91	□□□□□ -1.94
CAF20	YOR276W	AI5_BETA	Q9ZZX0	354 aa		2.91	□□□□□ -1.94
CAF20	YOR276W	THP2	O13539	261 aa	Known RBP	2.9	□□□□□ -1.95
CAF20	YOR276W	ADH1	P00330	348 aa	Known RBP	2.9	□□□□□ -1.95
CAF20	YOR276W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.9	□□□□□ -1.95	not detected
CAF20	YOR276W	COQ1	P18900	473 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	PBN1	P25580	416 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	CAT2	P32796	670 aa	Known RBP	2.9	□□□□□ -1.95
CAF20	YOR276W	DBP7	P36120	742 aa	Known RBP	2.9	□□□□□ -1.95
CAF20	YOR276W	POP8	P38208	133 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	YBR096W	P38256	230 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	EDC2	P40023	145 aa	Predicted RBP	2.9	□□□□□ -1.95
CAF20	YOR276W	CGR1	P53188	120 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	TLG1	Q03322	224 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	PEX10	Q05568	337 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	DCR2	Q05924	578 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	YPR098C	Q06089	161 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	TIR4	Q12218	487 aa	Predicted RBP	2.9	□□□□□ -1.95
CAF20	YOR276W	YCT1	Q12235	531 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	YOL085C	Q99345	113 aa		2.9	□□□□□ -1.95
CAF20	YOR276W	MRPL25	P23369	157 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	RPB9	P27999	122 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	EHD3	P28817	500 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	VPH2	P32341	215 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	VMA6	P32366	345 aa	Known RBP	2.89	□□□□□ -1.95
CAF20	YOR276W	MAL32	P38158	584 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	YHL049C	P38722	271 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	YIL054W	P40524	105 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	RPC17	P47076	161 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	LIF1	P53150	421 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	MAL12	P53341	584 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	BNA7	Q04066	261 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	TSA2	Q04120	196 aa		2.89	□□□□□ -1.95
CAF20	YOR276W	RRS1	Q08746	203 aa	Known RBP	2.89	□□□□□ -1.95
CAF20	YOR276W	SNU23	Q12368	194 aa	Predicted RBP	2.89	□□□□□ -1.95
CAF20	YOR276W	CBP6	P07253	162 aa	Predicted RBP	2.88	□□□□□ -1.95
CAF20	YOR276W	POX1	P13711	748 aa		2.88	□□□□□ -1.95
CAF20	YOR276W	COX10	P21592	462 aa		2.88	□□□□□ -1.95
CAF20	YOR276W	YCR102C	P25608	368 aa		2.88	□□□□□ -1.95
CAF20	YOR276W	VPS21	P36017	210 aa	Known RBP	2.88	□□□□□ -1.95
CAF20	YOR276W	CBT1	P36038	271 aa	Predicted RBP	2.88	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms