RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C UIP3P39547 235 aa1.9□□□□□ -2.11
UBP2YOR124C VAB2P40003 282 aa1.9□□□□□ -2.11
UBP2YOR124C VMA21P41806 77 aa1.9□□□□□ -2.11
UBP2YOR124C UFE1P41834 346 aa1.9□□□□□ -2.11
UBP2YOR124C AIM25P47140 327 aa1.9□□□□□ -2.11
UBP2YOR124C MNN10P50108 393 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C MRL1Q06815 381 aa1.9□□□□□ -2.11
UBP2YOR124C YOL073CQ08232 322 aa1.9□□□□□ -2.11
UBP2YOR124C REX4Q08237 289 aa1.9□□□□□ -2.11
UBP2YOR124C PDH1Q12428 516 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C PRM4Q12498 284 aa1.9□□□□□ -2.11
UBP2YOR124C CDC9P04819 755 aa1.9□□□□□ -2.11
UBP2YOR124C RPL9AP05738 191 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C DAL82P21705 255 aa1.9□□□□□ -2.11
UBP2YOR124C LSB5P25369 354 aa1.9□□□□□ -2.11
UBP2YOR124C RSC6P25632 483 aa1.9□□□□□ -2.11
UBP2YOR124C POP5P28005 173 aa1.9□□□□□ -2.11
UBP2YOR124C YHL041WP38730 149 aa1.9□□□□□ -2.11
UBP2YOR124C DOT6P40059 670 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C SYS1P41544 203 aa1.9□□□□□ -2.11
UBP2YOR124C LSB3P43603 459 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C RPL9BP51401 191 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C MDM34P53083 459 aa1.9□□□□□ -2.11
UBP2YOR124C PNC1P53184 216 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C ALG12P53730 551 aa1.9□□□□□ -2.11
UBP2YOR124C UTP15Q04305 513 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C CTS2Q06350 511 aa1.9□□□□□ -2.11
UBP2YOR124C YPR174CQ06616 221 aaPredicted RBP1.9□□□□□ -2.11
UBP2YOR124C RRG1Q12167 365 aaPredicted RBP1.9□□□□□ -2.11
UBP2YOR124C PRS5Q12265 496 aaKnown RBP1.9□□□□□ -2.11
UBP2YOR124C TMA17Q12513 150 aa1.9□□□□□ -2.11
UBP2YOR124C YIL002W-AQ3E7Z5 69 aa1.9□□□□□ -2.11
UBP2YOR124C AI1P03875 834 aa1.89□□□□□ -2.11
UBP2YOR124C RPS31P05759 152 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C DST1P07273 309 aa1.89□□□□□ -2.11
UBP2YOR124C MET3P08536 511 aa1.89□□□□□ -2.11
UBP2YOR124C UBI4P0CG63 381 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C RPL40AP0CH08 128 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C RPL40BP0CH09 128 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C DDI2P0CH63 225 aa1.89□□□□□ -2.11
UBP2YOR124C DDI3P0CH64 225 aa1.89□□□□□ -2.11
UBP2YOR124C RPS18AP0CX55 146 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C RPS18BP0CX56 146 aaPredicted RBP1.89□□□□□ -2.11
UBP2YOR124C MAK32P23060 363 aa1.89□□□□□ -2.11
UBP2YOR124C TKL1P23254 680 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C PRO1P32264 428 aa1.89□□□□□ -2.11
UBP2YOR124C NTF2P33331 125 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C RTC2P38279 296 aa1.89□□□□□ -2.11
UBP2YOR124C ARP1P38696 384 aa1.89□□□□□ -2.11
UBP2YOR124C CTF8P38877 133 aa1.89□□□□□ -2.11
UBP2YOR124C FLX1P40464 311 aa1.89□□□□□ -2.11
UBP2YOR124C SEH1P53011 349 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C RSM23Q01163 450 aa1.89□□□□□ -2.11
UBP2YOR124C KIN4Q01919 800 aa1.89□□□□□ -2.11
UBP2YOR124C SHH3Q04487 196 aa1.89□□□□□ -2.11
UBP2YOR124C NOC4Q06512 552 aaPredicted RBP1.89□□□□□ -2.11
UBP2YOR124C MRX9Q07349 420 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C TEN1Q07921 160 aa1.89□□□□□ -2.11
UBP2YOR124C TMA7Q3E764 64 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C PHO2P07269 559 aa1.89□□□□□ -2.11
UBP2YOR124C PET9P18239 318 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C MSK1P32048 576 aa1.89□□□□□ -2.11
UBP2YOR124C ELF1P36053 145 aa1.89□□□□□ -2.11
UBP2YOR124C OMA1P36163 345 aa1.89□□□□□ -2.11
UBP2YOR124C AGP2P38090 596 aa1.89□□□□□ -2.11
UBP2YOR124C DBP8P38719 431 aa1.89□□□□□ -2.11
UBP2YOR124C RTT105P40063 208 aa1.89□□□□□ -2.11
UBP2YOR124C RFC4P40339 323 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C OST3P48439 350 aa1.89□□□□□ -2.11
UBP2YOR124C UBC9P50623 157 aaPredicted RBP1.89□□□□□ -2.11
UBP2YOR124C JAC1P53193 184 aa1.89□□□□□ -2.11
UBP2YOR124C YGR015CP53208 328 aa1.89□□□□□ -2.11
UBP2YOR124C COQ6P53318 479 aa1.89□□□□□ -2.11
UBP2YOR124C TY1A-MR1Q04215 440 aa1.89□□□□□ -2.11
UBP2YOR124C SSL1Q04673 461 aaPredicted RBP1.89□□□□□ -2.11
UBP2YOR124C TAZ1Q06510 381 aa1.89□□□□□ -2.11
UBP2YOR124C NDD1Q08887 554 aa1.89□□□□□ -2.11
UBP2YOR124C YTM1Q12024 460 aaPredicted RBP1.89□□□□□ -2.11
UBP2YOR124C TY1A-BLQ12266 440 aa1.89□□□□□ -2.11
UBP2YOR124C EAF3Q12432 401 aa1.89□□□□□ -2.11
UBP2YOR124C CSR2Q12734 1121 aa1.89□□□□□ -2.11
UBP2YOR124C MPD2Q99316 277 aa1.89□□□□□ -2.11
UBP2YOR124C CCH1P50077 2039 aa1.89□□□□□ -2.11
UBP2YOR124C TDH3P00359 332 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
UBP2YOR124C MSW1P04803 379 aa1.89□□□□□ -2.11
UBP2YOR124C PMA1P05030 918 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C YAR066WP0CX18 203 aa1.89□□□□□ -2.11
UBP2YOR124C YHR214WP0CX19 203 aa1.89□□□□□ -2.11
UBP2YOR124C URA6P15700 204 aa1.89□□□□□ -2.11
UBP2YOR124C LAC1P28496 418 aa1.89□□□□□ -2.11
UBP2YOR124C MDH3P32419 343 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
UBP2YOR124C UTR5P32630 166 aa1.89□□□□□ -2.11
UBP2YOR124C SSS1P35179 80 aa1.89□□□□□ -2.11
UBP2YOR124C MRPL28P36527 147 aa1.89□□□□□ -2.11
UBP2YOR124C RRP3P38712 501 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C FMP10P40098 244 aa1.89□□□□□ -2.11
UBP2YOR124C FAF1P40546 346 aaPredicted RBP1.89□□□□□ -2.11
UBP2YOR124C RPN11P43588 306 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C RMD9P53140 646 aaKnown RBP1.89□□□□□ -2.11
UBP2YOR124C HCH1P53834 153 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms